Pairwise Alignments

Query, 252 a.a., chitooligosaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., chito-oligosaccharide deacetylase from Escherichia coli BL21

 Score =  136 bits (343), Expect = 4e-37
 Identities = 94/232 (40%), Positives = 129/232 (55%), Gaps = 12/232 (5%)

Query: 3   VIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHLRF 62
           +I NADDFGL++G N GI++A  +G+V STT +V   A  HAVQL++  P L IG+H   
Sbjct: 5   LIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVL 64

Query: 63  TAGRPLTGERNLTDEHGVFTAYRDFWQ--RRDYQP-EAIYHEAIAQVEHFLKL-GLTLSH 118
           T G+PLT    LT + GV   +   WQ    D  P E I  E ++Q   F++L G   +H
Sbjct: 65  TMGKPLTAMPGLTRD-GVLGKW--IWQLAEEDALPLEEITQELVSQYLRFIELFGRKPTH 121

Query: 119 LDSHHHAHTHPQLAPIIYEVAKKYHVPLR-DIGMAGEEAFGCR--YHFTDFFYDQRLGID 175
           LDSHHH H  PQ+ PI+   A +  + LR D  MA +     R    F+  FY + +   
Sbjct: 122 LDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDLTVNLRTTQGFSSAFYGEEISES 181

Query: 176 PLMKHLLELKERFD-LVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQL 226
             ++ L +   R D  +EVMCHPAF+D  + + S Y   R  EL +LTSA L
Sbjct: 182 LFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQ-SAYCFPRLTELDVLTSASL 232