Pairwise Alignments

Query, 446 a.a., PTS sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., PTS sugar transporter subunit IIC from Pseudomonas simiae WCS417

 Score =  123 bits (309), Expect = 2e-32
 Identities = 102/411 (24%), Positives = 185/411 (45%), Gaps = 33/411 (8%)

Query: 23  AKVGNQPHVRAMRDGFIVAMPFIIVGSFILIFAFPPFAEDTTNVFG---RVWLNFATTHF 79
           A + +   +RA+R+G +  +P ++V +  LI +      +   + G   +V   FA  H 
Sbjct: 15  AALASTESLRAIREGLLWILPCLLVSAGFLILS------ECARMLGFDAQVVAFFAGLH- 67

Query: 80  DIIMMPFNMSMGIMTIFVSLGVAYSLAKAYKMDGITSAVLSLMSFLLVAAPAKEDSLSMA 139
                  N    ++ + V+  + Y LA  +++  +  A L L   ++     +E   + A
Sbjct: 68  -------NQISSVIPLLVAASIGYMLAIQHRLPQLPVAFLCLAHVVVATFILREYPRASA 120

Query: 140 HMGGTGIFTAVMCAFFAVELYRFMKKHNITIRMPEQ-VPPAIARSFEVLLPVLAIFLTLY 198
                 +F A+      V    ++ ++  T  + E  V   +  +  +++P     L L 
Sbjct: 121 TFV---LFIAIASPLLNVPAIAWLHRYRWTRLVNEDLVGHNLRGTINMVVPGAITALALV 177

Query: 199 P-LSLFVQAEYGMLI--PDAVMAMFKPLISASNTLPAIIGALLVCQLLWFAGIHGAAIVV 255
             LSL +Q  Y   +  P  + A+  P  S        +   L+  LLWF GIHG   + 
Sbjct: 178 VVLSLLLQIPYVAQLQGPQVLHALESPYGSG-------LFVTLMNSLLWFFGIHGVYAMQ 230

Query: 256 GLLSPIFLTNISANIDAFVTGQPVPNIFTQPFWDFYIFIGGSGATLALVI-LMSFSRSAH 314
            L   +    ++ N  A   G+P+  +        + FIGGSG  L L++ ++ FS+S  
Sbjct: 231 PLFD-VLDQAVALNGAASAAGEPINYLLNSGLLGSFAFIGGSGGALCLLLAILLFSKSQS 289

Query: 315 LKSIGRMSAVPGFFQINEPVIFGSPVVMNPILFLPFVFAPVINATIAYFAIQLGFVGMGV 374
           ++ +   S     F ++E ++FG P+++NP LF+PF+  P +NA +A   +Q+G+V   V
Sbjct: 290 MRLLAMASLPLSLFNVSEVLLFGLPIILNPRLFIPFLVVPALNAMVALTVVQMGWVSPAV 349

Query: 375 ATTPWTTPAIIGASWGSGWTFTPVLLVVGLLILDLLIYLPFFKMFEKQVLE 425
            + P T P ++ A   +   F  V L + LL L  L+Y P+     +Q  E
Sbjct: 350 VSVPLTAPVLLNAYLSTHGDFAAVALQLTLLGLGTLVYAPYVLAIHRQATE 400