Pairwise Alignments

Query, 446 a.a., PTS sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., PTS N,N'-diacetylchitobiose transporter subunit IIC from Escherichia coli ECRC62

 Score =  207 bits (526), Expect = 7e-58
 Identities = 130/450 (28%), Positives = 238/450 (52%), Gaps = 27/450 (6%)

Query: 10  IIGIVEKHIAPIAAKVGNQPHVRAMRDGFIVAMPFIIVGSFILIF--AFPPFAEDTTNVF 67
           +I  +EK + P A K+G QPHV A+++GFI  MP  + G+  ++    F  F E +    
Sbjct: 4   VIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYS 63

Query: 68  GRVWLNFATTHF-----DIIMMPFNMSMGIMTIFVSLGVAYSLAKAYKMDGITSAVLSLM 122
             + L+ +T         I    +N ++GIM++     +  +LA+  K+D + + +LS+ 
Sbjct: 64  LGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVA 123

Query: 123 SFLLVAAPAKEDSLSMAH--MGGTGIFTAVMCAFFAVELYRFMKKHNITIRMPEQVPPAI 180
           +F+ V   +  ++ ++    +GG  I + ++      E++ F+ + N  I++P+ VP ++
Sbjct: 124 AFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASV 183

Query: 181 ARSFEVLLPVLAIFLTLYPLSLFVQAEYGMLIPDAVMAMFKPLISASNTLPAIIG--ALL 238
           +RSF  L+P   I L++  +  +    +G      +M     L+++   L +++G   ++
Sbjct: 184 SRSFSALIPGF-IILSVMGIIAWALNTWGTNFHQIIMDTISTLLAS---LGSVVGWAYVI 239

Query: 239 VCQLLWFAGIHGA----AIVVGLLSPIFLTNISA-----NIDAFVTGQPVPNIFTQPFWD 289
              LLWF GIHGA    A+  G+++P  L NI+      +++A +      +I+ +P  D
Sbjct: 240 FVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLD 299

Query: 290 FYIFIGGSGATLALVILMSF-SRSAHLKSIGRMSAVPGFFQINEPVIFGSPVVMNPILFL 348
            +IF+GGSGATL L++ +   SR A  + + +++   G FQINEP++FG P++MNP++F+
Sbjct: 300 SFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFI 359

Query: 349 PFVFAPVINATIAYFAIQLGFVGMGVATTPWTTPAIIGASWGSGWTFTPVLLVVGLLILD 408
           PFV    I A I   A  +G +       PWT P  +GA + +  +   +L+ +  L + 
Sbjct: 360 PFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIA 419

Query: 409 LLIYLPFFKMFEK--QVLEQEQPVESKVKA 436
            LIYLPF  +  K    +++E+  E    A
Sbjct: 420 TLIYLPFVVVANKAQNAIDKEESEEDIANA 449