Pairwise Alignments

Query, 446 a.a., PTS sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., PTS N,N'-diacetylchitobiose transporter subunit IIC from Escherichia coli ECOR38

 Score =  205 bits (521), Expect = 3e-57
 Identities = 132/451 (29%), Positives = 238/451 (52%), Gaps = 29/451 (6%)

Query: 10  IIGIVEKHIAPIAAKVGNQPHVRAMRDGFIVAMPFIIVGSFILIF--AFPPFAEDTTNVF 67
           +I  +EK + P A K+G QPHV A+++GFI  MP  + G+  ++    F  F E +    
Sbjct: 4   VIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYS 63

Query: 68  GRVWLNFATTHF-----DIIMMPFNMSMGIMTIFVSLGVAYSLAKAYKMDGITSAVLSLM 122
             + L+ +T         I    +N ++GIM++     +  +LA+  K+D + + +LS+ 
Sbjct: 64  LGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVA 123

Query: 123 SFLLVAAPAKEDSLSMAH--MGGTGIFTAVMCAFFAVELYRFMKKHNITIRMPEQVPPAI 180
           +F+ V   +  ++ ++    +GG  I + ++      E++ F+ + N  I++P+ VP ++
Sbjct: 124 AFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASV 183

Query: 181 ARSFEVLLPVLAIFLTLYPLSLFVQAEYGMLIPDAVM-AMFKPLISASNTLPAIIG--AL 237
           +RSF  L+P   I L++  +  +    +G      +M  +  PL S    L +++G   +
Sbjct: 184 SRSFSALIPGF-IILSVMGIIAWALNTWGTNFHQIIMDTISTPLAS----LGSVVGWAYV 238

Query: 238 LVCQLLWFAGIHGA----AIVVGLLSPIFLTNISA-----NIDAFVTGQPVPNIFTQPFW 288
           +   LLWF GIHGA    A+  G+++P  L NI+      +++A +      +I+ +P  
Sbjct: 239 IFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPML 298

Query: 289 DFYIFIGGSGATLALVILMSF-SRSAHLKSIGRMSAVPGFFQINEPVIFGSPVVMNPILF 347
           D +IF+GGSGATL L++ +   SR A  + + +++   G FQINEP++FG P++MNP++F
Sbjct: 299 DSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMF 358

Query: 348 LPFVFAPVINATIAYFAIQLGFVGMGVATTPWTTPAIIGASWGSGWTFTPVLLVVGLLIL 407
           +PFV    I A I   A  +G +       PWT P  +GA + +  +   +L+ +  L +
Sbjct: 359 IPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGI 418

Query: 408 DLLIYLPFFKMFEK--QVLEQEQPVESKVKA 436
             LIYLPF  +  K    +++E+  E    A
Sbjct: 419 ATLIYLPFVVVANKAQNAIDKEESEEDIANA 449