Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., BCCT transporter from Pseudomonas simiae WCS417

 Score =  203 bits (517), Expect = 1e-56
 Identities = 137/467 (29%), Positives = 231/467 (49%), Gaps = 24/467 (5%)

Query: 73  IIASFDWLFIWSGNLFLLFCVGLVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGL 132
           I+ +F WLF       ++    +  S  GK+R+GG+ A+   S   W  +     + +G+
Sbjct: 42  ILKNFSWLFSAGSFAMVVLTAIVYFSALGKVRIGGEDAQPLLSKWRWFMVALCTTLAVGV 101

Query: 133 MFWSVAEPVAYYTGWYETPLGVEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFC 192
           +FW+ AEP+ +  G   T L +EA +  A   AM     HW + P+AIY V +L  A   
Sbjct: 102 LFWTTAEPLYHLYG-PPTSLPIEAGSSAAKTFAMSTMFLHWTITPYAIYLVPSLVFALVF 160

Query: 193 YNKGLPLSMRSVFYPLLGD-RAWGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHV 251
           YN+    S+ ++  PLLG+ R   +AG ++D LA+ A + G+A+SLG GA   A G+   
Sbjct: 161 YNRRSNFSIGAMLEPLLGEARVKRYAG-LIDTLAMFALVAGMASSLGTGALTLAGGLAQY 219

Query: 252 FGFESGIGLQIAVICVVTGLATLSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSVTL 311
            G E+       +I ++      S   G+  G+ ++S+ N  +   L   V + G ++ +
Sbjct: 220 IGGETTPLRLAIIIAIIVITFVASAASGLQKGIVMLSSFNTWIMLALGLFVLLCGPTLYM 279

Query: 312 TSIPT-TLMAYLQNLIPLSNPHGRED-EVWFQGWTVFYWAWWISWSPFVGMFIARVSKGR 369
            S+   +L  YL      S   G    + W   WTVFYW+ W +W+P   +F+ ++ +G 
Sbjct: 280 FSLGVESLGVYLDTFFSRSLFTGAASGDTWPHSWTVFYWSVWFAWAPVSALFLGKIGRGY 339

Query: 370 TIREFIVAVLLIPTLVTLVWMSVFGGLAV------DQVINEIGVLGQNGLTDVSLAMFQM 423
           T+REFI   +L P L T VW+ +F G ++      D  +N   VL + G+  V   ++QM
Sbjct: 340 TVREFIHINMLYPALFTAVWICIFSGTSLYFDALGDGSLNR--VLNEQGVEHV---LYQM 394

Query: 424 FDSLVFGKVLSVIAVVLVLVFFITSSDSGSLVIDSITSGG-----KLDSPVLQRVFWAVL 478
           F  L    ++    + +  + F+T++DS + VI ++ S G      LD     ++ W V+
Sbjct: 395 FQQLPASGLMIAFLLFVAFISFVTAADSSTDVIANLCSKGVTADSDLDGNPALKIVWGVI 454

Query: 479 EGAVAVALLWIGGTEAVQALQAGVISTALPFTVILLLMCVSLWKGLK 525
            G+V+  ++   G + V+ L        LP  +++LL   SL   LK
Sbjct: 455 IGSVSWVMVSFVGIDGVKMLSN---LGGLPGMLLVLLASTSLIFWLK 498