Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., Choline transporter from Pseudomonas putida KT2440

 Score =  340 bits (871), Expect = 1e-97
 Identities = 188/506 (37%), Positives = 305/506 (60%), Gaps = 22/506 (4%)

Query: 35  VHNPVFGISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVG 94
           V+  VF  SA +I     L + V     ++ L   ++ +  +F W ++     +LLF V 
Sbjct: 16  VNRVVFFTSALMILVLTALLIAVPETAGQV-LGVAQKWLTRTFGWYYMLVICGYLLFVVY 74

Query: 95  LVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLGV 154
           L  S +G ++LGG+  + D S+ +W  MLF++G+GI L+++  +EP+ +Y   +  P G 
Sbjct: 75  LAFSDYGSLKLGGKDDQPDFSYGAWAGMLFSSGIGISLLYFGASEPLDHY---FNPPEGT 131

Query: 155 EANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAW 214
            A+  +AA+  +  T  HWGLH WAIY +V L++ +F Y    PL++RS  YPL+G+R W
Sbjct: 132 PASL-EAARQGLQLTFLHWGLHGWAIYALVGLAVGYFAYRHNQPLALRSALYPLVGER-W 189

Query: 215 --GWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLA 272
             G AG+ VDI  +  TL GL T+LG+GA Q +SG+ ++FG +      + VI V+ G+A
Sbjct: 190 VKGAAGNAVDIFGMFVTLLGLVTNLGIGAMQVSSGLEYLFGMDHSKTNLLVVILVMAGVA 249

Query: 273 TLSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSV-TLTSIPTTLMAYLQNLIPLS-- 329
           T++ V G++ G++ +SN+N+++   LL  V + G ++  L      +  YL  ++  +  
Sbjct: 250 TVAAVSGVENGIRRLSNLNIMLFSGLLIFVLLGGETLHLLNGFVQNVGDYLNGIVLKTFD 309

Query: 330 ----NPHGREDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLV 385
                    + E W   WTVFYWAWWISW PFVGMFIAR+SKGRT+R+ ++ VLLIP   
Sbjct: 310 LYVYEGEAGKSERWLGLWTVFYWAWWISWGPFVGMFIARISKGRTVRQLVMGVLLIPLGF 369

Query: 386 TLVWMSVFGGLAVDQVINEIGV-LGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVF 444
           TL W+S+FG  A+D VIN+  V LG+  L   S++++Q+ +     K++  +AV +  V 
Sbjct: 370 TLAWLSIFGNTALDLVINQGAVELGKTALEQPSMSIYQLLEHFPAAKIVIGVAVFVGFVL 429

Query: 445 FITSSDSGSLVIDSIT-SGGKL--DSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAG 501
           F+T +DSG++++ +++ +GGK+  D+P    VFW+V+   V + LL+ G  EA+Q +   
Sbjct: 430 FLTPADSGAVMMANLSCTGGKVDEDAPHWMVVFWSVVITLVTIGLLFAGNFEAMQTM--- 486

Query: 502 VISTALPFTVILLLMCVSLWKGLKTE 527
           V+   LPF+V+L+L    L+K +K +
Sbjct: 487 VVLAGLPFSVVLVLFMFGLYKAMKQD 512