Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  417 bits (1073), Expect = e-121
 Identities = 222/494 (44%), Positives = 318/494 (64%), Gaps = 13/494 (2%)

Query: 38  PVFGISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVGLVI 97
           PVF  SA L+   +L       H A+   + V++ II +  W +I    L L+  V L +
Sbjct: 14  PVFYTSAILVFLLVLYATAFQEH-AQTLFEQVQRWIITNASWFYILVVALVLISVVFLAV 72

Query: 98  SPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLGVEAN 157
           S +G I+LG   ++ D+   SW AMLF+AGMGIGLMF+ VAEPV +++    TP   +  
Sbjct: 73  SRYGDIKLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVMHFS----TPPVGDPG 128

Query: 158 TPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAWGWA 217
           T  AA+ AM  T FHWGLH WAIY +VAL LA+F +  GLPL++RS  YPL+G+R +G  
Sbjct: 129 TVAAAREAMKITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALYPLIGERIYGPI 188

Query: 218 GHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLATLSVV 277
           GH VD+ A+L T+FG+ATSLG G  Q  SG HHVFG      +Q+ +I     LATLSV 
Sbjct: 189 GHAVDVFAILGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILITATCALATLSVA 248

Query: 278 RGIDGGVKVISNINMIVAFLLLALVAVIGYSVTL--TSIPTTLMAYLQNLIPLS-NPHGR 334
            G+D G++++S +N+ +A +L+  V ++G +V L  T +  T  AYL +++  + N +  
Sbjct: 249 SGLDKGIRILSELNLSLAVILMLFVLLLGPTVFLLQTYVQNT-GAYLSDIVNKTFNLYAY 307

Query: 335 EDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVWMSVFG 394
           E   W  GWT+ YW WW+SWSPFVG+FIAR+S+GRTIREF+  VL +P   TL+WM+VFG
Sbjct: 308 EPTDWIGGWTLLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPAGFTLLWMTVFG 367

Query: 395 GLAVDQVINE-IGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITSSDSGS 453
             A+  ++N+ +  L      D SLA+F   +   F  ++S++AV++V+VFF+TS+DSG+
Sbjct: 368 DSAIHMILNDGVKDLAAVVSEDSSLALFAFLEHFPFSSIISLVAVLMVVVFFVTSADSGA 427

Query: 454 LVIDSITSGGKLDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTALPFTVIL 513
           LV+D + S G+  SP+ QR+FW+V  GAVA+ALL   G   ++ALQ   I++ALPF VIL
Sbjct: 428 LVVDMLASSGQGHSPLWQRIFWSVCIGAVAIALLLANG---LKALQTATIASALPFAVIL 484

Query: 514 LLMCVSLWKGLKTE 527
           L+    L+K L  +
Sbjct: 485 LVAIWGLFKALSLD 498