Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Glycine betaine transporter OpuD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  390 bits (1001), Expect = e-113
 Identities = 213/499 (42%), Positives = 311/499 (62%), Gaps = 32/499 (6%)

Query: 42  ISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIA----SFDWLFIWSGNLFLLFCVGLVI 97
           +SAGLI A +L  V+     A   LD V +  +A     F WL++W     ++F + L  
Sbjct: 5   VSAGLILAIVLWGVV-----APDALDAVFEGALAVITRDFGWLYLWVVLGLVVFALVLAF 59

Query: 98  SPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLGVEAN 157
           S +G ++LGG+  + + S  SW +MLFAAGMGIGL+FW VAEP+++Y      P G+ A 
Sbjct: 60  SRYGDLKLGGEDDEPEFSIGSWFSMLFAAGMGIGLVFWGVAEPISHYG---TPPPGIVAR 116

Query: 158 TPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAWGWA 217
           TP+AA  AM  + FHWGLHPWA+Y +VALS+AFF + KG    + +        +A  WA
Sbjct: 117 TPEAANAAMRYSFFHWGLHPWAVYSIVALSIAFFQFRKGGTALVSTAV------QALPWA 170

Query: 218 -----GHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLA 272
                G VV++LAV+AT FG+A SLG+GA Q  SG+H + G   G   Q+ +I V T L 
Sbjct: 171 PLQRLGPVVNVLAVIATAFGVAASLGMGALQINSGLHALLGLPVGEVQQVGIIVVTTVLF 230

Query: 273 TLSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSVTLT-SIPTTLMAYLQNLIPLS-- 329
            +S V G+  G+K +SNIN+++A LL  +V V+G +V +  +  +TL +Y+  L+ +S  
Sbjct: 231 LVSAVSGVTKGIKWLSNINLVLAALLALVVFVVGPTVVIIDAFTSTLGSYVSELVRMSLR 290

Query: 330 -NPHGREDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLV 388
             P    D  W  GWT+FYWAWW+SWSPFVG+FIARVS+GRTIREF++  +L P+L   V
Sbjct: 291 MTPF--RDSTWVGGWTIFYWAWWVSWSPFVGLFIARVSRGRTIREFVLGTMLAPSLAAFV 348

Query: 389 WMSVFGGLAVDQVINEIGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITS 448
           W SVFGG A+   I +   +      DVS A+F MF +L    ++S +A VLVL+FF+TS
Sbjct: 349 WFSVFGGTALHLEIMQGVPVADAVRADVSTALFAMFKALPMTALMSGVATVLVLLFFVTS 408

Query: 449 SDSGSLVIDSITSGGKLDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTALP 508
            DS +LV+  +++GG+ +     ++ W +L   +A++LL  GG +AV   Q   I  ALP
Sbjct: 409 GDSATLVLGMMSTGGEENPSARVKIAWGLLISGIAISLLLAGGLKAV---QTATIVFALP 465

Query: 509 FTVILLLMCVSLWKGLKTE 527
           F V+++LM ++LW+G++ +
Sbjct: 466 FAVVIVLMAIALWRGVRDD 484