Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., L-carnitine/gamma-butyrobetaine antiporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  189 bits (481), Expect = 2e-52
 Identities = 131/493 (26%), Positives = 246/493 (49%), Gaps = 26/493 (5%)

Query: 46  LIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVGLVISPFGKIRL 105
           +I   L    + D   A + ++ V   +   + W F W   + L     LV  P+ K RL
Sbjct: 20  IIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRL 79

Query: 106 GGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLGVEANTPQAAQLA 165
           G +  K + S  SW+ M+FA+     ++FW   E + YY      P G+E N+  A ++ 
Sbjct: 80  GDE--KPEFSTASWIFMMFASCTSAAVLFWGSIE-IYYYIS--TPPFGLEPNSTGAKEIG 134

Query: 166 MGATMFHWGLHPWAIYGVVALSLAFFCYNKGLP-LSMRSVFYPLLGDR-AWGWAGHVVDI 223
           +  ++FHWG  PWA Y  ++++ A+F + + +  +   S   PL+G++ A G  G +VD 
Sbjct: 135 LAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMDVIRPSSTLVPLVGEKHAKGLFGTIVDN 194

Query: 224 LAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLATLSVVRGIDGG 283
             ++A +F + TSLGL        +  +FG    + L   +I     L  + V  G+  G
Sbjct: 195 FYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKG 254

Query: 284 VKVISNINMIVAFLLLALVAVIGYSVTLTSIPTT----LMAYLQNLIPLSNPHGREDEVW 339
           V++ S++   ++FL+L  V ++  +  + +  T     L+ +L  ++  ++  G+    +
Sbjct: 255 VRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMHLPRMLFYTDAIGKGG--F 312

Query: 340 FQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVWMSVFGG---L 396
            QGWTVFYWAWW+ ++  + +F+AR+S+GRT+RE    +++  T  T +  +V G    L
Sbjct: 313 PQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLL 372

Query: 397 AVDQ-VINEIGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITSSDSGSLV 455
            +D+ ++N   ++ Q+G   V+ A+ + + +L           +L  +  +T  ++ S  
Sbjct: 373 LMDKNILNIPQLIEQHG---VARAIIETWAALPLSTATMWGFFILCFIATVTLINACSYT 429

Query: 456 IDSITSGGKLDS---PVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTALPFTVI 512
           +   T     D    P+L R+ W+VL G + + LL +GG   ++ +Q  +I+   P   +
Sbjct: 430 LAMSTCREVRDGEEPPLLVRIGWSVLVGIIGIVLLALGG---LKPIQTAIIAGGCPLFFV 486

Query: 513 LLLMCVSLWKGLK 525
            +++ +S  K  K
Sbjct: 487 NIMVTLSFIKDAK 499