Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  197 bits (500), Expect = 1e-54
 Identities = 153/458 (33%), Positives = 240/458 (52%), Gaps = 34/458 (7%)

Query: 89  LLFCVGLVI----SPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYY 144
           +L  +GLVI    S +G IRLG    K ++S LSWL M   AG+G   ++W VAE  AYY
Sbjct: 2   VLLAMGLVIYLATSKYGNIRLG--EGKPEYSTLSWLFMFICAGLGSSTLYWGVAE-WAYY 58

Query: 145 TGWYETP-LGVEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCY---NKGLPLS 200
              Y+TP L +   + QA + ++  + FHWG+  WA Y + +L +A+  +   NKGL LS
Sbjct: 59  ---YQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLS 115

Query: 201 MRSVFYPLLGDRAWGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGL 260
              +   + G R  G  G +VD++ ++AT+  L  SL + A     G+  + G      +
Sbjct: 116 --GIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTV 173

Query: 261 QIAVICVVTGLATLSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSVTLT-SIPTTLM 319
           Q  VI +  G+  LS   GI+ G++ +S +    AFLL  LV ++G +  +T SI   + 
Sbjct: 174 QAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIG 233

Query: 320 AYLQNLIPLS---NPHGREDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIV 376
              QN + +S   +P G  D  + + WTVFYW WWIS++P V MF+ RVS+GR I+E I 
Sbjct: 234 LTTQNFLQMSLFTDPLG--DGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIW 291

Query: 377 AVLLIPTLVTLVWMSVFGGLAVDQVINEIGVLGQNGLTDV---SLAMFQMFDSLVFGKVL 433
            ++L  T+    +  V    A+ Q IN  GV+    + +      A+ Q+  SL  GK L
Sbjct: 292 GLILGSTVGCWFFFGVMESYAIHQFIN--GVINVPQVLETLGGETAVQQVLMSLPAGK-L 348

Query: 434 SVIAVVLVLVFFITSSDSGSLVIDSITSGGKL----DSPVLQRVFWAVLEGAVAVALLWI 489
            + A + V++ F+ S         + TS   L    D     R+FW V+   + +++L+ 
Sbjct: 349 FLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFT 408

Query: 490 GGTEAVQALQAGVISTALPFTVILLLMCVSLWKGLKTE 527
           G   +++ ++  V+ TALPF VILL+      + LK +
Sbjct: 409 GA--SLETMKTTVVLTALPFLVILLVKVGGFIRWLKQD 444