Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., choline BCCT transporter BetT from Escherichia coli ECRC100

 Score =  336 bits (861), Expect = 2e-96
 Identities = 187/510 (36%), Positives = 296/510 (58%), Gaps = 15/510 (2%)

Query: 34  DVHNPV-FGISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFC 92
           D  NPV F  SAGLI  F L T+L     A + +      +  +F W ++ +  L+++F 
Sbjct: 11  DKINPVVFYTSAGLILLFSLTTILFRDFSA-LWIGRTLDWVSKTFGWYYLLAATLYIVFV 69

Query: 93  VGLVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPL 152
           V +  S FG ++LG + +K + S LSW AMLFAAG+GI LMF+SVAEPV  Y    + P 
Sbjct: 70  VCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYM---QPPE 126

Query: 153 GVEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDR 212
           G    T +AA+ AM  T+FH+GL  W++Y ++ ++L +F Y   LPL++RS  YP+ G R
Sbjct: 127 GA-GQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKR 185

Query: 213 AWGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLA 272
             G  GH VDI AV+ T+FG+AT+LG+G  Q   G+  +F     +  + A+I +   +A
Sbjct: 186 INGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIA 245

Query: 273 TLSVVRGIDGGVKVISNINMIVAFLLLALVAVIG-YSVTLTSIPTTLMAYLQNLIPLS-N 330
           T+SV  G+D G++V+S +N+ +A  L+  V  +G  S  L ++   +  Y+   + ++ N
Sbjct: 246 TISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLN 305

Query: 331 PHGREDEV-WFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVW 389
               +  V W   WT+F+WAWW++WSPFVG+F+AR+S+GRTIR+F++  L+IP   TL+W
Sbjct: 306 SFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLW 365

Query: 390 MSVFGGLAVDQVINEIGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITSS 449
           +SVFG  A+ ++I+      +  +       + +          + +A +  L+F++TS+
Sbjct: 366 LSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSA 425

Query: 450 DSGSLVIDSITSGGK---LDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTA 506
           DSG+LV+ + TS  K    D+P   RVFW+V  G + + +L    T  + ALQ   +   
Sbjct: 426 DSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLM---TNGISALQNTTVIMG 482

Query: 507 LPFTVILLLMCVSLWKGLKTEPEFMASSKR 536
           LPF+ ++  +   L+K LK E     S+ R
Sbjct: 483 LPFSFVIFFVMAGLYKSLKVEDYRRESANR 512