Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., Choline-glycine betaine transporter from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  223 bits (569), Expect = 1e-62
 Identities = 137/484 (28%), Positives = 243/484 (50%), Gaps = 17/484 (3%)

Query: 54  TVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVGLVISPFGKIRLGGQAAKAD 113
           T L++A   +  ++ +   I+  F  LF +S    ++ C  +  SP GK+R+GG+ AK  
Sbjct: 30  TSLINADFFESSMEGINNFILDHFSLLFSYSSFAMVITCALVGFSPLGKVRIGGKTAKPK 89

Query: 114 HSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYT---GWYETPLGVEANTPQAAQLAMGATM 170
            + +SW +++    + +G++FW  AEP+ +Y     +   P G EA    AAQ +MGA  
Sbjct: 90  FNRISWFSIVLCTTVAVGILFWGSAEPLFHYLYPPSFTSNPSGSEA----AAQFSMGAIF 145

Query: 171 FHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAWGWAGHVVDILAVLATL 230
            HWGL P+AIY + +L +A   YN  L  S+ S   PL+G +       ++D++ + A +
Sbjct: 146 LHWGLTPYAIYAIPSLGIALAIYNTKLTFSLSSPLAPLIGKKHRPVLAALIDMICLFALV 205

Query: 231 FGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLATLSVVRGIDGGVKVISNI 290
            G++ SLG G    + G+   +   +   L   V  V+     LS   GI+ G+K +S +
Sbjct: 206 AGMSASLGAGILSISGGLSDQWPHLNRTFLLPVVTLVIICTFILSAASGIERGIKNLSQL 265

Query: 291 NMIVAFLLLALVAVIG-YSVTLTSIPTTLMAYLQNLIPLSNPHGR-EDEVWFQGWTVFYW 348
           N     L    +  IG  S  + +    + +YL+ ++PLS   G   +  W Q W+VF W
Sbjct: 266 NFFFFVLFSIFILCIGPTSAMVDAAYWGIKSYLKEVLPLSLQWGDVRNSDWSQSWSVFNW 325

Query: 349 AWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVWMSVFGGLAVDQVINEIGVL 408
           A W++W+P   +F+ +++ GRT+REF++   L+P    L WMS+FGG  +     +   L
Sbjct: 326 ANWMAWAPITALFLGKIAYGRTVREFLLFNWLLPAAFCLCWMSIFGGSTLHYAAQDT-TL 384

Query: 409 GQNGLTDV--SLAMFQMFDSLVFGKVLSVIAVVLVLVFFITSSDSGSLVIDSIT----SG 462
            +N L  +     ++Q+F  + F  +L    V  + + ++T++DS +  + S++    S 
Sbjct: 385 FKNLLETIGPESIIYQVFGEIGFTNLLRPAFVTAMFISYVTAADSSTEAMASLSMKKFSL 444

Query: 463 GKLDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQAL-QAGVISTALPFTVILLLMCVSLW 521
            + DS    +V W  L G +A  ++   G + ++ L   G +   L  + I + +   +W
Sbjct: 445 ERFDSDTNLKVIWGTLVGLLAWIMITFTGIDGIKMLSNLGGLPALLLLSGITISLNFLMW 504

Query: 522 KGLK 525
              K
Sbjct: 505 NPTK 508