Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., choline/carnitine/betaine transport from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  458 bits (1179), Expect = e-133
 Identities = 245/498 (49%), Positives = 329/498 (66%), Gaps = 11/498 (2%)

Query: 33  FDVHNPVFGISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFC 92
           FDVH PVF  ++ LI  F+ +T++V     K   D +K  I     WLFI + N+F++FC
Sbjct: 6   FDVHAPVFWPASVLIIIFIAITLIVGEPMEK-AFDAIKFFITDKTGWLFIIAINIFIVFC 64

Query: 93  VGLVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPL 152
             L  S +G IRLGG+ A+ + S  +W AMLF+AGMGIGL+FW VAEPV++Y    + P 
Sbjct: 65  FYLAFSKYGTIRLGGKDAETEFSTSAWFAMLFSAGMGIGLLFWGVAEPVSHYA---KPPY 121

Query: 153 GVEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDR 212
           G E  +  +AQ  M  T  HWG H WAIY VVAL+LAFF +N+ LPL++RS+FYP+LGDR
Sbjct: 122 G-EPFSIGSAQRGMNLTFLHWGFHAWAIYAVVALALAFFTFNRKLPLTIRSIFYPILGDR 180

Query: 213 AWGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLA 272
             GW G V+D++AVLATLFGLATSLG G +Q   G++++F  +  + +Q+ +I  +T +A
Sbjct: 181 IHGWIGDVIDVMAVLATLFGLATSLGFGVRQINGGLNYLFDVDISVTVQVLLISGITLMA 240

Query: 273 TLSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSVTL-TSIPTTLMAYLQNLIPLSN- 330
           T SV  G+D GV+V+S  N+ +A  LL  V + G +V +       L  YL   I +S  
Sbjct: 241 TASVFSGLDKGVRVLSEWNVRIAAALLIFVILAGPTVFIFRGFVQNLGNYLNQFIAVSTW 300

Query: 331 PHGREDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVWM 390
                D  W   WT+FYWAWW+SWSPFVGMFIAR+SKGRTIREFI+ VLL+P L+T  W+
Sbjct: 301 TEAYRDNEWQGTWTIFYWAWWVSWSPFVGMFIARISKGRTIREFILGVLLVPALLTFFWL 360

Query: 391 SVFGGLAV-DQVINEIGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITSS 449
           +  GG A+   + NE     ++ + D S A+F          + S I V+LV+ FF+TSS
Sbjct: 361 TAMGGSAIFMDMQNETHQFAKDIIKDESTALFVFLHEFPLSTLGSGIGVLLVMSFFVTSS 420

Query: 450 DSGSLVIDSITSGGKLDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTALPF 509
           DSGSLVIDSIT+GGKLD+PV QR+FWA+ EG VA  LL IGG   + ALQ   I+T LPF
Sbjct: 421 DSGSLVIDSITAGGKLDAPVGQRIFWALAEGTVAAVLL-IGG--GLTALQTATITTGLPF 477

Query: 510 TVILLLMCVSLWKGLKTE 527
            ++LL+MC SL++GL+ E
Sbjct: 478 LIVLLIMCFSLFRGLQKE 495