Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., secondary glycine betaine transporter BetU from Escherichia coli BL21

 Score =  429 bits (1104), Expect = e-124
 Identities = 238/499 (47%), Positives = 322/499 (64%), Gaps = 15/499 (3%)

Query: 35  VHNPVFGISAGLIAAFLLLT-VLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCV 93
           ++  VF  SA LI  FLL+    V    A      ++Q I  +  W +I +  L LL   
Sbjct: 17  INKAVFFTSALLI--FLLVAFAAVFPDVADKNFKLLQQQIFTNASWFYILAVALILLSVT 74

Query: 94  GLVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLG 153
            L +S +G I+LG   A+ D S+ SW AMLF+AGMGIGLMF+ VAEPV +Y      P+G
Sbjct: 75  FLGLSRYGDIKLGPDHAQPDFSYHSWFAMLFSAGMGIGLMFFGVAEPVMHYLS---PPVG 131

Query: 154 VEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRA 213
               T  AA+ AM  T FHWGLH WAIY +VAL LAFF Y  GLPL++RS  YP++GDR 
Sbjct: 132 TP-ETVAAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSALYPIIGDRI 190

Query: 214 WGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLAT 273
           +G  GH VDI AV+ T+FG+ATSLG G  Q  +G++H+FG      +Q+ +I V+TGLAT
Sbjct: 191 YGPVGHAVDIFAVIGTVFGVATSLGYGVLQVNAGLNHLFGVPINETVQVILIVVITGLAT 250

Query: 274 LSVVRGIDGGVKVISNINMIVAFLLLALVAVIGYSV-TLTSIPTTLMAYLQNLIPLS-NP 331
           +SVV G+D G++++S +N+ +A LLLALV  +G +V  L S       YL  L+  + N 
Sbjct: 251 ISVVSGLDKGIRILSELNLGLALLLLALVLCLGPTVLLLKSFVENTGGYLSELVSKTFNL 310

Query: 332 HGREDEV--WFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVW 389
           +  E +   W  GWT+ YW WW+SWSPFVGMFIARVS+GRTIREF+  VL +P   TL+W
Sbjct: 311 YAYEPKSSNWLGGWTLLYWGWWLSWSPFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMW 370

Query: 390 MSVFGGLAVDQVINEIGV-LGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITS 448
           M+VFG  A+  ++N+    L      DVSLA+F   +   F  VLS IA+ +V+VFF+TS
Sbjct: 371 MTVFGNSAIYLIMNQGATDLANTVQQDVSLALFNFLEHFPFSSVLSFIAMAMVIVFFVTS 430

Query: 449 SDSGSLVIDSITSGGKLDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTALP 508
           +DSG++V+D++ SGG  ++PV QR+FWA L G VA+ALL  GG   + ALQ   I++ALP
Sbjct: 431 ADSGAMVVDTLASGGVANTPVWQRIFWASLMGIVAIALLLAGG---LSALQTVTIASALP 487

Query: 509 FTVILLLMCVSLWKGLKTE 527
           F+VILL+    L K L+ +
Sbjct: 488 FSVILLISIYGLLKALRRD 506