Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., Glycine betaine transporter from Acinetobacter radioresistens SK82

 Score =  416 bits (1070), Expect = e-120
 Identities = 232/501 (46%), Positives = 315/501 (62%), Gaps = 25/501 (4%)

Query: 37  NPVFGISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVGLV 96
           NP   IS  +I    L  V+      ++    + Q I  SF W ++ S  LFL+   G+ 
Sbjct: 13  NPNVFISTVVIILIFLAIVIFAPDAFELLTKKLNQWITDSFSWFYVLSVALFLILLTGIA 72

Query: 97  ISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLGVEA 156
           +S  G+I+LG   ++ D+++ SW AMLF AGMGIGLMF+ VAEP+ +Y     +P   + 
Sbjct: 73  VSSMGRIKLGPDHSQPDYTYPSWFAMLFTAGMGIGLMFFGVAEPIMHYV----SPPSGQP 128

Query: 157 NTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAWGW 216
            T  AAQ AM  T FHWGLH WAIY VV LSLA+F Y   LPL +RS  YPL+G R +G 
Sbjct: 129 ETVLAAQQAMRVTFFHWGLHAWAIYAVVGLSLAYFAYRHQLPLKVRSALYPLIGKRIYGP 188

Query: 217 AGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGLATLSV 276
            G  VD  A + T+FG+ATSLG G  Q  SG++++FG+E  I  QI +I VV+ +A+LSV
Sbjct: 189 IGDGVDTFATIGTIFGVATSLGFGVTQINSGLNYLFGWEQSILTQIILIVVVSSIASLSV 248

Query: 277 VRGIDGGVKVISNINMIVAFLLLALVAVIGYSVTLTSIPTTLMA---YLQNLIPLS-NPH 332
             G+D GVK +S +N+I+A LLLA + + G S+ L  + TT+     Y+ NL  ++ N +
Sbjct: 249 FLGLDKGVKRLSELNLILALLLLAFIFLTGASIYL--LQTTIQTAGQYVSNLFSMTFNLY 306

Query: 333 GREDEVWFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLVWMSV 392
             +   W  GWT+ YWAWWISWSPFVGMFIARVS+GRT+REFI  VLLIPT  T++WM  
Sbjct: 307 AYQPNGWIGGWTIMYWAWWISWSPFVGMFIARVSRGRTVREFIAGVLLIPTGFTIIWMGF 366

Query: 393 FGGLAVDQVINEIGVLGQNGL-----TDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFIT 447
            G  A+  V+ E    G + L     TD S+A+F+    L +  V S++A VLV++FF+T
Sbjct: 367 IGNAALYNVMFE----GNSSLLEAVKTDSSVALFEFLTQLPWSGVSSILATVLVMLFFVT 422

Query: 448 SSDSGSLVIDSITSGGKLD-SPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVISTA 506
           S+DSG+LV D +TS  K D SP  QR+FW VL   +A+ LL  GG   + ALQ+  I +A
Sbjct: 423 SADSGALVTDYLTS--KTDQSPAWQRLFWTVLMALLAIILLMAGG---LGALQSATIMSA 477

Query: 507 LPFTVILLLMCVSLWKGLKTE 527
           LPFT I+LL+C  L K L+ +
Sbjct: 478 LPFTFIMLLICWGLLKALRLD 498