Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Two-component transcriptional response regulator, NarL/FixJ family from Variovorax sp. SCN45

 Score =  158 bits (400), Expect = 6e-44
 Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 7/205 (3%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           IR+ +VDDH +V DG  ARL   P +E+V  A +  EAL  +   +PD++LMDV M  MN
Sbjct: 6   IRLFLVDDHPLVRDGLRARLGSMPNLEIVGEAGSAAEALAQIDSVRPDLMLMDVGMKDMN 65

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           GIE   L+ +      ++ML+M+DN EY+ + +QAGA GY+LK+  A ++V AI+ V  G
Sbjct: 66  GIELAALLLQRQGAPHIVMLSMYDNPEYVQKALQAGARGYVLKDAPAAEIVAAIEAVSAG 125

Query: 129 ATYFCESTTSTLFSQEILPVANKPNP-LSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187
            T+   + +  LF  +      +P P L+ RE  IL  + +G SSK+IA  L +S RTVE
Sbjct: 126 GTFLSPAVSKKLFRTQ------EPRPLLTPRESEILSALGRGESSKQIARDLGLSVRTVE 179

Query: 188 THRQNIKHKLDIHSTAELAQYALQH 212
            HRQ+IK +L I   AEL +YA++H
Sbjct: 180 AHRQSIKRRLGIEGQAELIKYAVEH 204