Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Two-component transcriptional response regulator, NarL/FixJ family from Sphingobium sp. HT1-2

 Score =  124 bits (311), Expect = 1e-33
 Identities = 69/209 (33%), Positives = 122/209 (58%), Gaps = 6/209 (2%)

Query: 8   PIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIM 67
           PI +++VDDH ++ +G  A L  + ++ +V  A NG  A+E     +PD+VLMD+ M  M
Sbjct: 35  PISILVVDDHALLREGVRAMLATQADMRIVGEADNGRRAVEEYARLRPDIVLMDLQMAEM 94

Query: 68  NGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQ 127
            G++A   I+   P  ++++LT +      ++ ++AGAMGY+LK     +++ AI++VH 
Sbjct: 95  PGLDAIAAIRAIHPDARIIVLTTYSGDGRAIKALRAGAMGYLLKASLRKQLLDAIRSVHL 154

Query: 128 GATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187
           G  +  ++T +T  +  +L      +PL+ RE A+L + A G S+K++A  L+IS  TV+
Sbjct: 155 GGKHL-DATVATAIALHVL-----EDPLTEREIAVLSLAAWGNSNKQVAARLDISEETVK 208

Query: 188 THRQNIKHKLDIHSTAELAQYALQHGLLE 216
            H ++I  KLD          A++ GL++
Sbjct: 209 GHMKSIFSKLDATDRTHAVTLAIKRGLID 237