Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., two-componenent system BarA/UvrY - regulatory subunit from Pseudomonas putida KT2440

 Score =  120 bits (300), Expect = 2e-32
 Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 2/209 (0%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           IRV++VDDH +V  G    L     ++VV    +G  AL+L +  +PDVVLMDV MP + 
Sbjct: 2   IRVLVVDDHDLVRTGITRMLADIDGLQVVGEGDSGESALKLARELKPDVVLMDVKMPGIG 61

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           G+EATR +    P  KV+ +T+ +   +  +++QAGA GY+ K     +MVQAI+    G
Sbjct: 62  GLEATRKLLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYLTKGAGLDEMVQAIRLAFAG 121

Query: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKK-IATLLNISYRTVE 187
             Y        L  +   P  +  + LS RE  I  M+  GC   + I+  L +S +TV 
Sbjct: 122 QRYISPQIAQQLALKPFQPQGSPFDALSEREIQIALMIV-GCQKVQIISDKLCLSPKTVN 180

Query: 188 THRQNIKHKLDIHSTAELAQYALQHGLLE 216
           T+R  I  KL + S  EL   A++HG+++
Sbjct: 181 TYRYRIFEKLSVTSDVELTLLAVRHGMVD 209