Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 2e-25
 Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 5/290 (1%)

Query: 160 PKLSYSAWLDDWEWMIGTGLYIEDLSHEVEKMQAAV-NANIDTTFFSVVVILIVTVAVII 218
           P L    WL+ W+    +    ++ + +  +   ++   N+  +F        + V +  
Sbjct: 376 PSLDMDRWLNLWKRARASEDGPQNFATDCRRADGSILPTNVSLSFLRFAEAEYLVVYLND 435

Query: 219 VLTLAINLHEHRLADKNLKDLVHKTVLFQEDEKKHLARELHDGINQLLVSSKCHLEL--L 276
           V  L   L     ++  L++L       +E+EK  +ARE+HD + Q+L   K    +  L
Sbjct: 436 VTELRRTLAALLQSEAQLRELSAHLETVREEEKARIAREVHDELGQMLTVLKLETSMCEL 495

Query: 277 ANQLNDPKQIVHLEKSQHSLMTAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQ 336
           A    DP     L   +  +      VR ++  LRP  LD  G+ +A+      F+  +Q
Sbjct: 496 AYAQLDPGLHERLNSMKRLIAQLFQLVRDVATALRPPILD-AGIASAIEWQARRFEARTQ 554

Query: 337 MEIEMLFDTQPGKLKSEVATTLYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDD 396
           +   +        L    A  L+R++QE+L N+ +HA+A  V + L   G  L+L + DD
Sbjct: 555 IPCLVQVPDNLPTLSDAKAIGLFRILQEALTNVMRHAQAHTVELTLALEGTDLRLTISDD 614

Query: 397 GVGFSSKEALQKRGIGLRNMRERVEFIGGEFELSSEPQLGTEITVLLKLD 446
           GVGF   +  +    GL  MRERV  +GG+  L SE   GT ++V + LD
Sbjct: 615 GVGFVQAQG-RPVSFGLVGMRERVLIMGGQLSLDSELGEGTTLSVTVPLD 663