Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 4e-26
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 41/365 (11%)

Query: 38  IEIFRAKLMEERETSLKDSVEVAFDAVRLIANNPN---LSEAEAKQQVKAVLTNIRYGSD 94
           ++ +R  LM E++   +  VE A+  +   A       L+  +A+   K  +  +RYG++
Sbjct: 44  VKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQATQGTLTTEQAQNTAKQAIAQLRYGAN 103

Query: 95  GYFFAYDAQGTNLVHPIQPELVGQNLWQLQDERGDFL-IQALLFQAQSGGGYHQYLWRKP 153
            YF+  DAQ   ++HP++P+L G++L   +D  G  L ++ +    ++  G  +Y W KP
Sbjct: 104 DYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKP 163

Query: 154 SSGETVPKLSYSAWLDDWEWMIGTGLYIEDLSHEVEKMQAAVNANIDTTFFSVVVILIVT 213
            + + V K+SY      W W+IGTG+Y++D           VNA +     S++V ++ T
Sbjct: 164 GAEQPVDKVSYVKLFKPWGWIIGTGIYVDD-----------VNALVMQRLSSILVWVVGT 212

Query: 214 VAVIIVLTLAINLHEHRLADKNLKDLVHKTVLFQEDEKKHLARELHDGINQLLVSSKCHL 273
           + V+IVL   I     +  ++ L  L            K++A+   D   QL V+ K  L
Sbjct: 213 LLVLIVLASLIGRSITQPCEETLATL------------KNIAQGEGDLTRQLTVTGKDEL 260

Query: 274 ELLANQLNDPKQIVHLEKSQHSLMTAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKL 333
             +A   N     +   K +H     I E+  I+  +  SA D+L  Q A +   + +  
Sbjct: 261 AQIAQAFN-----LFTNKIRH----IIQEITPITESVTGSA-DEL-TQVAQSASSKAYDQ 309

Query: 334 HSQMEIEMLFDTQPGKLKSEVATTLYRVVQ--ESLNNIEKHAKAEKVTVLLQQMGDMLQL 391
           H  ++       Q      EVA + ++  Q   S N      + E +T+   QM  +   
Sbjct: 310 HQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGR-EMITLTSTQMQSLRDQ 368

Query: 392 MVRDD 396
           + R +
Sbjct: 369 LTRTE 373