Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (394), Expect = 2e-42
 Identities = 110/405 (27%), Positives = 207/405 (51%), Gaps = 29/405 (7%)

Query: 4   KAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVAFDA 63
           + KL+LL ++PL++ TA +  ++     +  Q+E+E +R  L++ ++  L+  + +   A
Sbjct: 13  RTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTA 72

Query: 64  VRLIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNLWQL 123
           V+ +  +    E +A  Q K +L  +R+ SDGYFFAYD+QG N +H I+PEL G+NL+ +
Sbjct: 73  VKPLYESDKAGENQA--QAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGM 130

Query: 124 QDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLYIED 183
           +DE G  +I  L+  +++G G+  + W KP+     PKL Y+ +L  W+W++GTG+YI+D
Sbjct: 131 KDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDD 190

Query: 184 LSHEVEKMQAAVNAN-----IDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNL-- 236
           +  +V + +A   A+     I     SVV ++   +AV ++++  I   +H ++      
Sbjct: 191 VDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVA 250

Query: 237 ---KDLVHKTVLFQEDEKKHLARELHDGINQL------LVSSKCHLELLANQLNDPKQIV 287
               DL  +  +  +DE   +A+  +  +++L      + +S   +E  A +L+      
Sbjct: 251 AGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQA 310

Query: 288 HLEKSQHSLMT--AINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDT 345
             +   H L T   +  V  +S   R  A +      A+ +      + +Q E+ +  D 
Sbjct: 311 SHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAV-AQKEVNLAID- 368

Query: 346 QPGKLKSEVATTLYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQ 390
             G+L +EV  T   V   S        +A K+T +L+ +GD+ +
Sbjct: 369 GIGELVNEVNQTSAAVGDLS-------QQAAKITQVLKVIGDIAE 406