Pairwise Alignments

Query, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  286 bits (732), Expect = 1e-81
 Identities = 161/452 (35%), Positives = 254/452 (56%), Gaps = 9/452 (1%)

Query: 1   MPLKAKLILLALLPLLIATASISWISIHQAKTLGQREIEIFRAKLMEERETSLKDSVEVA 60
           M L+ +++ LA+ PL++A   I+ +   Q+ TL +  I+ F   ++  +E  L +   +A
Sbjct: 1   MRLRNQILALAIGPLVLAIIIITALITWQSMTLARTSIDAFERNMLAAKEAELLNLTNLA 60

Query: 61  FDAVRLIANNPNLSEAEAKQQVKAVLTNIRYGSDGYFFAYDAQGTNLVHPIQPELVGQNL 120
             A+R + +     +  AK++VK +L ++ YG+DGYFF YD  G N+VHP Q    G N 
Sbjct: 61  LSAIRSVYDKAGPDDEAAKKEVKRILMDLDYGTDGYFFVYDYDGLNVVHPRQNFRPGNNW 120

Query: 121 WQLQDERGDFLIQALLFQAQSGGGYHQYLWRKPSSGETVPKLSYSAWLDDWEWMIGTGLY 180
             L D  G+ +I  L+ +A+ GGG  QY W KPS+ +   KLS++A LD W WMIGTG+Y
Sbjct: 121 LDLYDPDGNRVIYDLIVKAKEGGGLVQYKWEKPSTRKIADKLSFAAGLDKWRWMIGTGVY 180

Query: 181 IEDLSHEVEKMQAAVNANIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNLKDLV 240
           ++D+       +  +  +I   F  V +  +  V ++    + +NL + RLAD  LK+L+
Sbjct: 181 LDDVFAATAAAKEELRHSITWNFLIVALFAVPAVLLVFATCMLLNLRQQRLADGRLKELM 240

Query: 241 HKTVLFQEDEKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQIVHLE---KSQHSLM 297
            + +  Q++E+  +ARELHDGI+Q LV  +  ++L   ++  P  +  +E   K   +L 
Sbjct: 241 QRVIDTQDEERLRIARELHDGISQNLVGVRFAIDLARRKVT-PDNVGAVEAIGKGASALT 299

Query: 298 TAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDTQPGKLKSEVATT 357
            AI EVRRISH LRP  LDDLGL AAL  L+  F   + +   +        L  E    
Sbjct: 300 EAIKEVRRISHDLRPRVLDDLGLTAALEALISSFSERTGIAATLESVAFKHMLVPEARVA 359

Query: 358 LYRVVQESLNNIEKHAKAEKVTVLLQQMGDMLQLMVRDDGVGF----SSKEALQKRGIGL 413
           LYRV QE+L NIE+H+ A +VT+      + +Q++V D+G GF    +  E    +G+GL
Sbjct: 360 LYRVAQEALTNIERHSDATRVTIRFSSRDERVQMVVSDNGRGFPATRTENEMPADKGLGL 419

Query: 414 RNMRERVEFIGGEFELSSEPQLGTEITVLLKL 445
           RNM+ER+   GG  ++ S  + GT +  +L +
Sbjct: 420 RNMQERMTHFGGRLDVESSAK-GTVLRAVLPM 450