Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  191 bits (486), Expect = 4e-53
 Identities = 125/364 (34%), Positives = 200/364 (54%), Gaps = 38/364 (10%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFA------------FMPYRIQSIM 52
           +MF   +  +LLG+PVAF      L+F   A  +  +A             +P R+   M
Sbjct: 12  IMFATLVVFMLLGYPVAFALAANGLLFFFIAVELSPYAPDAITLSWPLLQALPERVFGTM 71

Query: 53  ENTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVV 112
            N VL+A+P F FMGLVL+++ +AE LLE++G+LFG + GG+A + + VG LLAA+TGVV
Sbjct: 72  ANEVLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGTVRGGLAYAVIFVGALLAATTGVV 131

Query: 113 GASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLF 172
            ASV++MGLISLP+ML+Y YD+ LA G I ASGTL QIIPPS+VLI++ D LG  VGD++
Sbjct: 132 AASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLIVMADQLGRSVGDMY 191

Query: 173 QAALWPGLMLVAAYIIYILIYAKLNPQAAMPI--------EPDADLSRRQ-EVVKALKAV 223
           + A  PGL+L   Y +++ +   ++P++A  +        EP       Q  V+ A  A 
Sbjct: 192 EGAFLPGLVLSGLYALFVFVVTIVSPKSAPGLPREALTCCEPSGARGVWQLGVLVAYSAA 251

Query: 224 IPPLAL------------IVVVLGSIFAGVATPTESAALGGAGAILLALAYGQFSWSMVY 271
           +  + +            I+ +  ++   + +   +  LG    +L A+    F+ +  Y
Sbjct: 252 VATVVMRDTGIKAGADYAILAICVAVVVALVSALLNRFLGARRLVLSAVLTAAFAGA--Y 309

Query: 272 DASKETVKVTAMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIV--TMLVI 329
              +E+   TA + A ++ A A   AF   G +      +++   ++  F++V   +L+ 
Sbjct: 310 VMLRESGHPTAGLMADIVAAGAL-YAFIAGGVERFTGMPLVSRMAERVTFVMVPPLLLIF 368

Query: 330 LILG 333
           L+LG
Sbjct: 369 LVLG 372



 Score =  184 bits (468), Expect = 5e-51
 Identities = 105/266 (39%), Positives = 159/266 (59%), Gaps = 29/266 (10%)

Query: 179 GLM--LVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGS 236
           GLM  +VAA  +Y  I   +     MP+     +SR  E V  +  ++PPL LI +VLG+
Sbjct: 321 GLMADIVAAGALYAFIAGGVERFTGMPL-----VSRMAERVTFV--MVPPLLLIFLVLGT 373

Query: 237 IFAGVATPTESAALGGAGAILLALAY-------GQFSWSMVYDASKETVKVTAMVFAILL 289
           IF GVATPTE  A+G  GA++LA           +FS S++  A++ T K++A    I++
Sbjct: 374 IFLGVATPTEGGAMGALGAMVLAALKRRLEKNPARFSLSILTQATQTTAKLSAFAIFIVV 433

Query: 290 GATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPIL 349
           GA  FS+ F    G   VE  + +LPG + GFL+    +I +L FF+DF E+ FI+VP+L
Sbjct: 434 GARVFSLTFYGINGHLWVEHLLTSLPGGQMGFLLFINALIFVLAFFLDFFELAFIVVPLL 493

Query: 350 APVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKS-------------VT 396
           AP A  + +D+ W  +++ +N+QTSF+ PPFGF+LFYL+ VAPK+             VT
Sbjct: 494 APAADKLGIDLIWLGVMLGVNMQTSFMHPPFGFALFYLRSVAPKTAYLDRLTGKRMEPVT 553

Query: 397 TMDIYRGVVPFILIQILVLISLMVFP 422
           +  IY G +PF++IQ++++  +  FP
Sbjct: 554 SAQIYWGAIPFVVIQLVMVGLIAAFP 579