Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  202 bits (515), Expect = 1e-56
 Identities = 121/423 (28%), Positives = 216/423 (51%), Gaps = 14/423 (3%)

Query: 9   VALFALLLGFPVAFTFGGIALIFGLWAEGI-EMFAFMPYRIQSIMENTV--------LMA 59
           + L  +LL F +A    G+ +  GL   G+  M    P  I  ++  TV        L A
Sbjct: 7   IQLSLVLLVFLIAILASGVWIALGLGLVGLLAMVLTTPVPIGQVLATTVWSASASWTLAA 66

Query: 60  VPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAM 119
           +PLF++MG +L +T+L+E++   +      + G +    V+   + AA +G   A+   +
Sbjct: 67  LPLFIWMGEILFRTRLSEEMFRGLAPWLQWLPGRLLHVNVIGCGIFAAVSGSSAATCATI 126

Query: 120 GLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPG 179
           G I+LP + K  YDKG++ G++  SGTLG +IPPSI +++      V V  +F A   PG
Sbjct: 127 GKIALPELDKRGYDKGMSLGSLAGSGTLGLLIPPSIPMVVYAVTANVSVLQVFLAGFLPG 186

Query: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFA 239
           L+++  Y  YI++++ LNP    P +P    +   E ++    ++P L LI  V  S+  
Sbjct: 187 LLVMGLYSGYIMLWSLLNPGRTPPRDPHMPFA---EKLRQSAKLVPCLLLIAAVFLSLVL 243

Query: 240 GVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFT 299
           G+AT TE AA G  GA+ LA   G  +W  + ++     +++ M+  I+ GA   + A  
Sbjct: 244 GIATATECAAWGVTGALALAWWSGTLTWKTLIESVMSATRLSCMIMLIIAGAAFTTAAMA 303

Query: 300 YTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVD 359
           YTG    + EW+  L        +   ++ +ILG  +D + +  +   I+ P+      D
Sbjct: 304 YTGIPVALAEWVQGLNLTPGKLALALTVMYIILGCLVDGISMIVLTAVIVLPMVKQAGFD 363

Query: 360 MTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLM 419
           + WF + + ++++ + +TPP GF+LF L+ ++ +   T  + +   PF ++  + +I + 
Sbjct: 364 LVWFGVYLVIHVEMAQITPPVGFNLFVLQNMSGRD--TFSVAKAAFPFFILLNIAVIIIT 421

Query: 420 VFP 422
            FP
Sbjct: 422 TFP 424