Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

 Score =  150 bits (378), Expect = 1e-40
 Identities = 112/420 (26%), Positives = 199/420 (47%), Gaps = 37/420 (8%)

Query: 14  LLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPY-----RIQSIMENTVLMAVPLFVFMGL 68
           +L+  P+AF+FG     +      I +    P      R    M + +L+AVPLFVF+G 
Sbjct: 213 VLMAVPIAFSFGLATFAY------ISLSTHTPSMVVIGRFDEGMGHLILLAVPLFVFLGQ 266

Query: 69  VLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGT--LLAASTGVVGASVVAMGLISLPV 126
           +++ T +A+ ++  +  L G + GG  +  VLVG   L++  +G   A + A+  +  P 
Sbjct: 267 LIEMTGMAKAMVAFLASLLGHVRGG--LHYVLVGAMYLVSGISGSKAADMAAVAPVLFPE 324

Query: 127 MLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAAY 186
           M K     G     + A+G   + IPPSIVLI +G V GV +  LF   L P L+L  A 
Sbjct: 325 MTKRGAKPGDLVALLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGGLLPALVLAVAL 384

Query: 187 IIYILIYAKLNPQAAMPIEPDADLS-----RRQEVVKALKAVIPPLALIVVVLGSIFAGV 241
              +    +           D DLS        EV +A    +P +AL  V+  ++  GV
Sbjct: 385 CSVVWWRYR-----------DEDLSGVAKASWGEVGRAFIISVPAIALPFVIRAAVIEGV 433

Query: 242 ATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTY 300
           AT TE + +G   +++   L Y +F +  ++    +T  ++  +  I+  AT  + A T 
Sbjct: 434 ATATEVSTIGIVYSVVAGLLIYRRFDFRRLFPMLVDTAALSGAILFIIGAATGMAWALTQ 493

Query: 301 TGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDM 360
           +G    + E M  LPG    FL V+++  ++LG  ++ +    +  P+L P+A  + V+ 
Sbjct: 494 SGFSNALAEAMRALPGGSASFLAVSIVAFVVLGSVLEGIPAIVLFGPLLFPIAKQVGVNE 553

Query: 361 TWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMV 420
             +++++ + +      PPFG   +     A  +++ +    G+ P +   I +LI L++
Sbjct: 554 VHYSMVVILAMGMGLFAPPFGVGYY-----AACAISRISPDAGMKPIVGYMIALLIGLII 608