Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Sialic acid TRAP transporter permease protein SiaT from Xanthobacter sp. DMC5

 Score =  171 bits (432), Expect = 8e-47
 Identities = 117/422 (27%), Positives = 215/422 (50%), Gaps = 19/422 (4%)

Query: 4   IVMFFVALFA--LLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVP 61
           +++F V L A  +  G P+AF+FG +A +  L        A +  R+   M + +L++VP
Sbjct: 228 LLIFLVGLVAASVFAGVPIAFSFG-LATVGYLTFTTTTPLAVVVGRMDEGMSHLILLSVP 286

Query: 62  LFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGT--LLAASTGVVGASVVAM 119
           LFVF+GL+++ T +A  L+  +  L G + GG  +S VL+G   L++  +G   A + A+
Sbjct: 287 LFVFLGLLIEMTGMARALVGFLASLLGHVRGG--LSYVLIGAMYLVSGISGSKAADMAAV 344

Query: 120 GLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPG 179
             +  P M+K    KG     + A+G   + IPPS+VL+ +G V GV +  LF   L P 
Sbjct: 345 TPVLFPEMVKRGAKKGDLVALLAATGAQTETIPPSLVLLTIGSVTGVSIAALFTGGLLPA 404

Query: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFA 239
           L+L  A +  ++ Y   N   +      A     ++++ +    +P +AL  V+ G++  
Sbjct: 405 LVLGLA-LCLLVRYRYRNDDLSNVKRVSA-----RDILWSAGIALPAIALPFVIRGAVME 458

Query: 240 GVATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAF 298
           G+AT TE + +G   ++++  L Y QF WS V      T  ++  +  I+  AT  + A 
Sbjct: 459 GIATATEVSTIGIIYSVVVGLLVYRQFEWSRVVPMMISTAALSGAILLIIGAATGMAWAL 518

Query: 299 TYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDV 358
           T +G  + + + M  LPG    F++V++L  +ILG  ++ +    +  P+L P+A  M +
Sbjct: 519 TQSGFSQNLAKVMSGLPGGAATFMVVSILAFIILGSVLEGIPSIVLFGPLLFPIARQMGI 578

Query: 359 DMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISL 418
               +A+++ + +      PPFG   +        ++  ++   G+ P +   +++LI+L
Sbjct: 579 HEVHYAMVVILAMGIGLFAPPFGVGYY-----CATAIGDVNPDEGMKPIVGYMLVLLIAL 633

Query: 419 MV 420
            V
Sbjct: 634 AV 635