Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

 Score =  168 bits (426), Expect = 3e-46
 Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 13/422 (3%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFV 64
           ++F V    LL+G PVAF  G  +L   L+ +   +  F   ++ S M    ++A+P F+
Sbjct: 5   ILFGVFSLLLLVGTPVAFCLGLASLATVLYLDLPPVVVFQ--QLNSGMNAFSMLAIPFFI 62

Query: 65  FMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISL 124
           F G ++ +  +A++L+     L G + GG+    V+  TL    +G   A   A+G I +
Sbjct: 63  FAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVADASAIGGIMI 122

Query: 125 PVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLG--VPVGDLFQAALWPGLML 182
           P M ++ Y K  A      S  +  +IPPS  +I+     G  + + DLF A + PGL+L
Sbjct: 123 PQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFTAGIMPGLLL 182

Query: 183 VAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVA 242
            AA +I   + A+          P         V++++ A IP + LI ++ G + +G+ 
Sbjct: 183 AAAMMITAYVVARNRGY------PAGTFPGWHAVLRSVVAAIPGIMLIGIIFGGVRSGIF 236

Query: 243 TPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYT 301
           T TES+ +    A+L+  L Y +  W+   +A+   V+ TAMV  ++  A +F     + 
Sbjct: 237 TATESSCIAVIYALLVTTLVYREMHWADFVEATLGAVRTTAMVLLVIGTAASFGWLMAFL 296

Query: 302 GGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMT 361
              +   E M  +  + +  L++  +++LILG F+D   +  I  PI  P+     +D  
Sbjct: 297 QVPKATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMIIICTPIFLPLVKAFGIDPV 356

Query: 362 WFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVF 421
            F +++ +N      TPP G  LF   G A   +T  +  + + PF    I VL+ +   
Sbjct: 357 HFGVILILNAGIGLNTPPVGSVLFV--GCAVGKITIGEAMKTIWPFFGASIAVLMIVTYV 414

Query: 422 PS 423
           P+
Sbjct: 415 PA 416