Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  206 bits (523), Expect = 2e-57
 Identities = 128/371 (34%), Positives = 201/371 (54%), Gaps = 33/371 (8%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFA-----FMPYRIQSIMENTVLMA 59
           +MF   +  LLLG+PVAF+     LIFGL    + +F       +P R+   M N VL+A
Sbjct: 50  IMFGALVLFLLLGYPVAFSLAANGLIFGLIGIYLGLFEPKFLQALPERVYGTMNNEVLLA 109

Query: 60  VPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAM 119
           VP F FMGL+L+++ +AE LL+++G++FG I GG+A + + VG LLAA+TGVV ASV++M
Sbjct: 110 VPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISM 169

Query: 120 GLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPG 179
           GLISLP+ML+Y YD+ +A G I ASGTL QIIPPS+VLI++ D L   VGD+++ A  PG
Sbjct: 170 GLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPG 229

Query: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFA 239
           L+L + Y +YI I + + P AA  +  +A   R  E     K +   +   V   G  F 
Sbjct: 230 LLLASLYAVYIFIISSIFPNAAPGLPLEAQTLRDPE----QKTLPSRIMGAVAAAGFAFL 285

Query: 240 GVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFT 299
                      G    +     +G  S+ +++     T K       +L  +   ++A +
Sbjct: 286 IARGSLPGLTAGALPGVANMAVWGIGSFVVLFFIMSGTAK-------LLTPSLFIALALS 338

Query: 300 YTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFV--------------EICFII 345
             G  EL+E   +    D   ++++TM   + + F +  +              ++ F++
Sbjct: 339 IAGAIELMEMSHVKFGAD---YVVLTMSATVGIAFVVAVINRVFRLKLLSKLAEQVVFVM 395

Query: 346 VPILAPVAVLM 356
           VP LA + +++
Sbjct: 396 VPPLALIFLVL 406



 Score =  198 bits (503), Expect = 5e-55
 Identities = 96/213 (45%), Positives = 143/213 (67%), Gaps = 13/213 (6%)

Query: 223 VIPPLALIVVVLGSIFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTA 282
           ++PPLALI +VLG+IF GVATPTE  A+G  GA++LA A G+  + ++  A+  T K++A
Sbjct: 395 MVPPLALIFLVLGTIFIGVATPTEGGAMGSLGAVILAFARGRLKFDLLRQATYSTAKLSA 454

Query: 283 MVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEIC 342
            V  ILLGA  FS+ F    G + VEE +++LPG + GFLI    ++ +L FF+D+ E+ 
Sbjct: 455 FVLFILLGARVFSLTFYGVDGHKWVEELLVSLPGGQTGFLIAVNALVFVLAFFLDYFELA 514

Query: 343 FIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPK--------- 393
           FII+P+L P A  M +D+ WF +++A+N+QTSF+ PPFGF+LF+L+ VA K         
Sbjct: 515 FIIIPLLGPAADKMGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSVAAKVPYVDRVTG 574

Query: 394 ----SVTTMDIYRGVVPFILIQILVLISLMVFP 422
                VTT  IY G VPF+ IQ++++  +++FP
Sbjct: 575 KMMQPVTTGQIYWGAVPFVCIQLVMVALIILFP 607