Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  180 bits (456), Expect = 8e-50
 Identities = 121/425 (28%), Positives = 213/425 (50%), Gaps = 15/425 (3%)

Query: 2   IGIVMFFVALFALL-LGFPVAFTFG--GIALIFGLWAEGIEMFAFMPYRIQSIMENTVLM 58
           + ++  F+ LF  + LG P+A + G  G   I     + +   A    ++    +    +
Sbjct: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAI---KLFETSDAYTFL 57

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVA 118
           A+P F+  G  +    +A++L++      G I GG+AI+ VL   L AA +G   A+V A
Sbjct: 58  AIPFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAA 117

Query: 119 MGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWP 178
           +G I++  M++  Y K    G IC +GTLG +IPPSIV+++        VG LF A + P
Sbjct: 118 VGSIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIP 177

Query: 179 GLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIF 238
           GL+L    +I I I A++     +P +P A     +E + + +     L L+V++LG I+
Sbjct: 178 GLLLGLMLMIAIYIVARIK---KLPAQPRATF---REWLTSARRAFWGLLLLVIILGGIY 231

Query: 239 AGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMA 297
           +G+ TPTE+AA+    +  +AL  Y             E+ ++  M+  I+  A  F+  
Sbjct: 232 SGMFTPTEAAAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHV 291

Query: 298 FTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMD 357
            T     + +  W+++      GFLI+  +V+LI G F++   I  I+ PI  P+A+ + 
Sbjct: 292 LTTEQIPQEITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLG 351

Query: 358 VDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLIS 417
           +D     I++ +N++   + PP G +LF    V    +T     R  +P+++I ++ LI 
Sbjct: 352 IDPIHLGIVMVVNMEIGLVHPPVGLNLFVTSAVT--GLTLGQTIRAALPWLMILLVFLIM 409

Query: 418 LMVFP 422
           +   P
Sbjct: 410 VTYLP 414