Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score =  160 bits (405), Expect = 1e-43
 Identities = 117/428 (27%), Positives = 208/428 (48%), Gaps = 20/428 (4%)

Query: 2   IGIVMFFVA--LFALLLGFPVAFTFGGIALIFGLWAEGIEM-FAFMPYRIQSIMENTVLM 58
           + +++FFV   L  +L G P+AF FG     FG  A   +     +  R+   M + +L+
Sbjct: 225 LNLLVFFVGVVLACVLCGIPIAFAFG--LGTFGYLALTTDTALPVIIGRMDEGMSHLILL 282

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVA 118
           AVPLFVF+GL+++ T +A+ ++  +  L G + GG  +S VLVG +   S G+ G+    
Sbjct: 283 AVPLFVFLGLLIEMTGMAKAMVAFLASLLGHVKGG--LSYVLVGAMYLVS-GISGSKAAD 339

Query: 119 MGLIS---LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAA 175
           M  I+    P M K   D+G     + A+G   + +PPS+VLI +G V GV +  LF   
Sbjct: 340 MAAIAPALFPEMKKRGADEGELVALLAATGAQTETVPPSLVLITIGSVTGVSIAALFTGG 399

Query: 176 LWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLG 235
           L P ++L     + + +  +    + +   P       ++V++     +P LAL  V+  
Sbjct: 400 LLPAVILGLMLCVVVFMRNRHEDLSQVARPP------WKQVMRLALVALPALALPFVIRA 453

Query: 236 SIFAGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGATAF 294
           ++  GVAT TE + +G   A++  L  Y QF W  +      T  ++  +  I+  ATA 
Sbjct: 454 AVVEGVATATEVSTIGIVYAVVAGLVVYRQFDWRRLGPMLVATASLSGAILLIIGTATAM 513

Query: 295 SMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAV 354
           +   T +G    + E M +LPG    FL V+++  ++LG  ++ +    +  P+L P+A 
Sbjct: 514 AWGLTQSGFSRWLAEAMASLPGGAPMFLAVSLVTFVVLGSVLEGIPAIVLFGPLLFPIAR 573

Query: 355 LMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILV 414
            + +    +A+++ +++      PP G    Y    A   V      R +V ++L  ++ 
Sbjct: 574 QLGIHEVHYAMVVVLSMGLGLFAPPLGVG--YYAACAIGRVRPDAGIRPIVGYMLALLVG 631

Query: 415 LISLMVFP 422
            I++   P
Sbjct: 632 TIAVAAIP 639