Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score =  167 bits (423), Expect = 9e-46
 Identities = 120/430 (27%), Positives = 213/430 (49%), Gaps = 20/430 (4%)

Query: 2   IGIVMFFVALFA--LLLGFPVAFTFGGIALIFGLWAEGIEM-FAFMPYRIQSIMENTVLM 58
           + +V+FFV + A  +L G P+AF+F      FG  A         M  R+   M + +L+
Sbjct: 206 LNLVIFFVVIVAATVLSGVPIAFSFA--LATFGYLALTTRTPLLVMVGRLDEGMSHLILL 263

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVA 118
           AVPLF+F+G +++ T +A  +++ +  L G + GG  +S VL+G +   S G+ G+ +  
Sbjct: 264 AVPLFIFLGALIEMTGMARAMIQFLASLLGHVRGG--LSYVLIGAMYLVS-GISGSKIAD 320

Query: 119 MGLIS---LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAA 175
           M  I+    P M K     G     + A+G   + IPPSIVLI +G V GV +  LF   
Sbjct: 321 MAAIAPVLFPEMTKRGAKPGDLVALLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGG 380

Query: 176 LWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLG 235
           L P ++L AA  +  +++ +   +    ++  +    ++E+ K L   +P + L  V+  
Sbjct: 381 LLPAVVLGAA--LCAVVWWRYRREDLSGVQRYS----KREIGKLLLVALPAVLLPFVIRA 434

Query: 236 SIFAGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGATAF 294
           ++  GVAT TE + +G   A ++ L  Y QF W  +     +T  ++  +  I+  ATA 
Sbjct: 435 AVVEGVATATEVSTIGIVYAAVVGLVVYRQFDWRRLKPMLVDTASLSGAIIFIVGCATAM 494

Query: 295 SMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAV 354
           +   T +G  + +   M  LPG  +GFL V+++  ++LG  ++ +    +  P+L P+A 
Sbjct: 495 AWGLTQSGFSQDLARVMGTLPGGAYGFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAK 554

Query: 355 LMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILV 414
              V    +A+++  ++      PPFG    Y    A   V   +  R +  +I   ++ 
Sbjct: 555 AAGVHEVHYAMVVIFSMGIGLFAPPFGVG--YYGACAVSKVNPDEGIRHIWGYIGAMLVG 612

Query: 415 LISLMVFPSF 424
           L+ + +FP F
Sbjct: 613 LVIVALFPWF 622