Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (475), Expect = 6e-52
 Identities = 122/439 (27%), Positives = 223/439 (50%), Gaps = 29/439 (6%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFV 64
           ++F + +  +++G P+A + G  +++F LW     + +       +   +  L+A+P F+
Sbjct: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFI 64

Query: 65  FMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISL 124
                +    +A++++     + G   GG+AI++V+   + AA +G   A+VVA+G I +
Sbjct: 65  LASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVI 124

Query: 125 PVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVA 184
             M+K  Y K  A G IC +GTLG +IPPSIV+++      V VG +F   + PGL+   
Sbjct: 125 AGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGL 184

Query: 185 AYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATP 244
             II I I A++     +P +P       +E +KA K     L L+V++LG I+ G+ TP
Sbjct: 185 MLIIAIYITARIK---NLPKQPFVGW---KEALKAAKEASWGLLLVVIILGGIYGGIFTP 238

Query: 245 TESAALGGAGAILLA----LAYGQFS-------------WSMVYDASKETV----KVTAM 283
           TE+AA+    +  +A       G F+              + V+  +K T+    K+T M
Sbjct: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298

Query: 284 VFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICF 343
           +  I+  A       T     +++ E M++       FLIV  L++L+ G F++   +  
Sbjct: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358

Query: 344 IIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRG 403
           I+ P++ P+A+ + +D     I++ +N++   +TPP G +LF   GVA  S+  M++ + 
Sbjct: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSM--MNVVKA 416

Query: 404 VVPFILIQILVLISLMVFP 422
            +P++ +  L LI +   P
Sbjct: 417 ALPWVGVMFLFLIIVTYVP 435