Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Pseudomonas sp. RS175

 Score =  156 bits (395), Expect = 1e-42
 Identities = 105/426 (24%), Positives = 199/426 (46%), Gaps = 13/426 (3%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAV 60
           M  +++    L  +L+G PVA+  G  ALI   W +    F  M  ++   +    L+A+
Sbjct: 1   MDALILLGSFLLLILIGMPVAYALGAAALIGAWWID--IPFQAMMIQVAGGVNKFSLLAI 58

Query: 61  PLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMG 120
           P FV  G ++ +  ++ +L+     L G + GG+++  ++  +   A +G   A   ++G
Sbjct: 59  PFFVLAGAIMAEGGMSRRLVAFASVLVGFVRGGLSLVNLVASSFFGAISGSSVADTASVG 118

Query: 121 LISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLG--VPVGDLFQAALWP 178
            + +P M +  Y +  A     +      + PPS   +L     G  V +G LF A + P
Sbjct: 119 SVLIPEMTRRGYPRDYATAVTVSGSVQALLTPPSHNAVLYSLAAGGTVSIGSLFMAGIVP 178

Query: 179 GLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIF 238
           G+++    +   L++AK          P  ++   ++ +K  K  +  +  + ++LG I 
Sbjct: 179 GILMNLCLMALCLVFAKKRNY------PKGEVIPLKQALKICKEAMWGMMTLFIILGGIL 232

Query: 239 AGVATPTESAALGGAGAILLALA-YGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMA 297
           +GV T TESAA+    A  + +  Y  + WS +      TV+  ++V  ++  A +F   
Sbjct: 233 SGVFTATESAAIAVVWAFFVTMCIYRDYKWSELPKLMHRTVRTISIVMILIGFAASFGYI 292

Query: 298 FTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMD 357
            T       +    + L  +++  L+   +++L+LG  +D   +  I+ PIL PV V + 
Sbjct: 293 MTLMEIPAKITTAFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILMPVIVGIG 352

Query: 358 VDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLIS 417
           VD   F +++ +NL    +TPP G  LF   G A   V+     + ++PF  +  LVL++
Sbjct: 353 VDPVQFGMIMLVNLGIGLITPPVGAVLFV--GSAIGKVSIESTVKALLPFYGMLFLVLLA 410

Query: 418 LMVFPS 423
           +   P+
Sbjct: 411 VTYIPA 416