Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  182 bits (461), Expect = 2e-50
 Identities = 114/420 (27%), Positives = 211/420 (50%), Gaps = 10/420 (2%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFV 64
           V  F  L A+ LG P+AF     A+   +  +G      +  +I    ++  L+A+P F+
Sbjct: 5   VFVFSLLGAMALGMPIAFALLVCAVAL-MMLQGSVDTTILSQKIIEGADSFPLLAIPFFM 63

Query: 65  FMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISL 124
             G ++    ++++++       G I GG+ I  ++   ++AA +G   A   A+  + +
Sbjct: 64  LAGELMNAGGISKRIVNFALAFVGHIRGGLGIVAIVAAVIMAAISGSAAADAAALATMLI 123

Query: 125 PVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVA 184
           P+M +  Y+   + G I A G +  ++PPSI +I+ G V  V +G LF AA+ PGL++  
Sbjct: 124 PMMRQAGYNIPRSAGLISAGGVIAPVLPPSIGMIIFGVVANVSIGKLFMAAIVPGLLMGV 183

Query: 185 AYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATP 244
           + ++  +I A+ +  A +P  P  +  R +  V +  A+I P+ ++    G +  GV TP
Sbjct: 184 SLLVAWMIVARKDQVAVLPRMPMRE--RAKVAVNSTWALIMPVGIV----GGMKFGVFTP 237

Query: 245 TESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGG 303
           TE+A +    A ++ +  Y +  W+ +Y       K TA+V  ++  A       T +  
Sbjct: 238 TEAAVVAAVYAFVVGMFVYRELKWNAIYPLIVSAAKTTAVVVFLIACALVSGWLITASDI 297

Query: 304 DELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWF 363
            + V E +          + + ML+++I+G  +DF     I+ P+L P+     +D  +F
Sbjct: 298 PQQVSELLQPFVDSPILLMAIMMLLVVIVGTALDFAPTLLILTPVLMPLVREAGIDPVYF 357

Query: 364 AILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFPS 423
            +L  MN     +TPP G  L  + G A  S++  ++ +G++PF+L +I VL  L++FPS
Sbjct: 358 GVLFIMNNAIGLITPPVGIVLNVVCGTAKLSMS--ELMKGIMPFLLAEIAVLFLLVLFPS 415