Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  199 bits (507), Expect = 1e-55
 Identities = 126/416 (30%), Positives = 215/416 (51%), Gaps = 12/416 (2%)

Query: 10  ALFAL-LLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGL 68
           A+ AL LLG PV     G ++I+ L+ +G++M       +     + +L+A+PLF+    
Sbjct: 13  AILALSLLGVPVGQAMIGGSVIY-LYMKGMDMGTVAEQLLNGTYSSFLLLAIPLFILAAT 71

Query: 69  VLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLPVML 128
           ++    + ++L++    L G   GG+A   VL   + A+ +G   A     G +   +M 
Sbjct: 72  IMGSGSVLDRLMKFCNALVGHFPGGLAQVNVLQSVVFASMSGSALADAAGSGKLMQVMMT 131

Query: 129 K-YRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAAYI 187
           K  RY  G A     AS  LG I+PPSI L+L   V G  +G LF A + PGL+L A  +
Sbjct: 132 KDNRYTAGFAAALTAASSVLGPILPPSIPLVLYALVSGTSIGYLFIAGVLPGLLLGAVQM 191

Query: 188 IYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPTES 247
             +   AK   +   P+EP   L   +E+ +  +   P L L VV+LG ++ G+ TPTE+
Sbjct: 192 GLVHYLAK---KRNFPVEPRVPL---RELPRITREAFPALMLPVVLLGCLYTGITTPTEA 245

Query: 248 AALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDEL 306
           A L  A A+L++ L Y    W  +YDA   + +++  +  ++ GA  F+   T       
Sbjct: 246 AGLAAAYALLISVLLYRSIGWKDLYDALLSSARISISIGMLIAGALVFNYVITVENIPAS 305

Query: 307 VEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAIL 366
           +   +        GFL++  L++L+LG F++   I  +I+P+L P AV + VD   F ++
Sbjct: 306 LSGILSTFDLSPLGFLLLVNLILLVLGCFLEGSTIILVILPVLLPTAVALGVDPVHFGVV 365

Query: 367 IAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFP 422
             +N+    +TPP+G  LF +  +A   ++ M++ R +VPF+++ I  L  + ++P
Sbjct: 366 AVLNIMIGLVTPPYGLLLFMMTKIA--DISLMELVREMVPFLVVMIGALAIVTLWP 419