Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  181 bits (460), Expect = 3e-50
 Identities = 110/379 (29%), Positives = 195/379 (51%), Gaps = 23/379 (6%)

Query: 57  LMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASV 116
           L  +PLF+ MG    +  +++ L +    + G   GG+A++ VL      A  G   A+ 
Sbjct: 54  LSVIPLFILMGNFATQGGISKALFQFAAVVMGRFKGGLAMAAVLASAGFGAICGSSVATA 113

Query: 117 VAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAAL 176
             +  ++LP M ++ Y   LA GT+ A GTLG +IPPS+ L++   +    +  LF AA+
Sbjct: 114 ATITSVALPEMKRHGYSGRLATGTLAAGGTLGVLIPPSVPLVIYAILTEQNIAKLFAAAM 173

Query: 177 WPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGS 236
            PG++ +  Y+I I +Y +L P  A    P+ D + ++  ++AL  V+P   + ++V G 
Sbjct: 174 VPGIIAMLGYMIAIAVYVRLVPGHA----PEHDANEQKLTLQALMGVLPIAIVFLIVFGG 229

Query: 237 IFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSM 296
           I+ G+ TPTE A +G A   + AL   + +W+ V      T   +AM+F I +GA   + 
Sbjct: 230 IYGGLFTPTEGAGVGAAATFVAALFKRELTWAKVKLCFYSTAAASAMIFMIFIGADLMNS 289

Query: 297 AFTYTGGD----ELVEEWMMNLPGDKWGFLIV--TMLVILILGFFIDFVEICFIIVPILA 350
           A   T        +++ W      D    ++V   +L  ++LG  +D + +  + +PI  
Sbjct: 290 ALALTQVPAQLASVIQGW------DVSPLMVVGGILLFYVVLGAVMDELSMILLTIPIFF 343

Query: 351 PVAVLMDVDM------TWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGV 404
           PV + +D  M       WF I++ M +    L PP G +++ + G+A K+V   + YRGV
Sbjct: 344 PVVMGLDFGMPQESVAIWFGIMVLMTVGFGLLAPPVGLNVYVVNGMA-KTVPIGESYRGV 402

Query: 405 VPFILIQILVLISLMVFPS 423
           +PF+   ++  + ++ FP+
Sbjct: 403 MPFLASDVIRSMLVLFFPA 421