Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  166 bits (421), Expect = 1e-45
 Identities = 107/416 (25%), Positives = 208/416 (50%), Gaps = 16/416 (3%)

Query: 11  LFALLLGFPVAFTF--GGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGL 68
           L  + LG P+A+     G+AL++ L     ++ A     +    ++  L+AVP F+  G 
Sbjct: 11  LLTMALGMPIAYALLASGVALMWHLDLFDAQILA---QNLIGGADSFPLLAVPFFMLAGE 67

Query: 69  VLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLPVML 128
           ++    L+ +++     + G + GG+   T++ G LL+A +G   A   A+  + LP+M 
Sbjct: 68  IMNVGGLSRRIVNLALTVVGHVRGGLGYVTIMAGCLLSALSGSAVADAAALTALLLPMMT 127

Query: 129 KYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAA-YI 187
           K  +D+  A G I A+G +G +IPPSI L++ G    V +  LF AA+ PGL++  A ++
Sbjct: 128 KAGHDRARAGGLIAATGVIGPVIPPSIGLVIFGVAANVSISKLFMAAIVPGLLIGGALWV 187

Query: 188 IYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPTES 247
            +  +  +        I+P    S + E++KA +  +  L L +++L  +  G+ TPTE+
Sbjct: 188 TWAWLVRR------ETIQPPPRKSGK-EILKAARDAVWALVLPIIILVGLRMGIFTPTEA 240

Query: 248 AALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDEL 306
           A +    A+ +A + Y + S+  +++      K +A+V  ++  A   +   T       
Sbjct: 241 AVVAAVYALFVATVVYRELSFKQLHEVFVVAAKTSAIVMFLIAAAMVSAWLITVADLPSK 300

Query: 307 VEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAIL 366
           V + +    G+    +   ML+++++G  +D      I+ P+L PV     +D  +F ++
Sbjct: 301 VVDMLQPFMGNPILLMAAIMLLVMVVGTAMDMTPTILILTPVLMPVVKAAGIDPVYFGVM 360

Query: 367 IAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFP 422
             +N     +TPP G  L  + GV    +   ++ RGV+PF++ +  V+  +++ P
Sbjct: 361 FIINNSIGLVTPPVGTVLNVVAGVGRMKMD--EVMRGVMPFMVAEFAVMFLMVLCP 414