Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  191 bits (484), Expect = 5e-53
 Identities = 127/422 (30%), Positives = 208/422 (49%), Gaps = 7/422 (1%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAV 60
           ++G++  FV L AL +   VA    G+ + FGL+A      A +     + + +  L  +
Sbjct: 9   LLGLLATFV-LIALHVPVGVAMGIAGV-VGFGLFAGFDPALAMIASETSNNLSSLELATI 66

Query: 61  PLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMG 120
           PLFV MG       L+E L      L G   GG+A++T+       A  G   A+    G
Sbjct: 67  PLFVLMGSFAGVAGLSEDLYRLAYALVGHRRGGLAMATIGGCAGFGAVCGSSVATAATFG 126

Query: 121 LISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGL 180
             SLP ML   Y  G A GT+ + GTLG +IPPS ++++   +    +  L+ AAL P L
Sbjct: 127 KASLPSMLSRGYSPGFAAGTVASGGTLGILIPPSSIMVIYAVLAQELIITLYIAALVPAL 186

Query: 181 MLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAG 240
           + V  ++  I +Y + +PQ A PI P A  + R +   A +   P +AL  +V+G +  G
Sbjct: 187 IAVVLHLCAITLYTRWHPQDA-PIGPRATAAERWQ---AARMSWPVVALAAIVIGGMAVG 242

Query: 241 VATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTY 300
           V T TESAA+G A A   A+     +W  +  A   T   + M++ +++GA+ F      
Sbjct: 243 VFTATESAAVGAALAFAFAVGRRALTWESLRQALLSTATTSGMIYVLIIGASLFGYFAAV 302

Query: 301 TGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDM 360
           T   + + E +       W  ++  M + ++ G   D V    I +P + P+      D 
Sbjct: 303 TQAPQALVEGVQASGIPVWAAVVALMAMFIVAGAVFDEVAAMVISMPFVLPLIKSWGFDP 362

Query: 361 TWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMV 420
            W+ ++  + ++   L PP G ++F +KGVAP+ +    IYRGV+P+++   L L  L++
Sbjct: 363 VWWGVINVVIIELGMLIPPLGMNVFVVKGVAPQ-IPIGAIYRGVMPYVISNFLRLAVLLM 421

Query: 421 FP 422
           FP
Sbjct: 422 FP 423