Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  369 bits (947), Expect = e-106
 Identities = 187/426 (43%), Positives = 282/426 (66%), Gaps = 10/426 (2%)

Query: 5   VMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAF-------MPYRIQSIMENTVL 57
           +MF V +  LL+GFPVAF+   I L+FG  A G+ M  F       +P R  +I+ N +L
Sbjct: 10  LMFAVMVVFLLIGFPVAFSLAAIGLMFG--AIGVWMGQFDVSFLHALPLRFHAIVANDLL 67

Query: 58  MAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVV 117
            ++P F  MG VL++ +LAE LLE +G+LFG + GGVA + VLVG +L A TG V ASVV
Sbjct: 68  WSIPFFTMMGAVLERCRLAEDLLEGVGKLFGAVPGGVAFAVVLVGAVLGAITGTVAASVV 127

Query: 118 AMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALW 177
           AMG+ISLPVM++Y Y+  LA G I ASGT+ Q+IPPS+VLI+L D LG  VGD++  A+ 
Sbjct: 128 AMGVISLPVMMRYGYNMRLATGVIAASGTITQLIPPSLVLIVLADQLGRSVGDMYLGAIG 187

Query: 178 PGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVV-KALKAVIPPLALIVVVLGS 236
           P ++ V  ++++I + A   P    P+  +     + ++V + L  ++P   L+ +VLG+
Sbjct: 188 PSILQVGVFLLFIAVVAIFRPHHMPPLPAEVRSGPKWKLVGQVLMGMLPAAGLMFLVLGT 247

Query: 237 IFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSM 296
           I AG ATPTES A+G  GA+LLA    + +   ++ A K T+++T MV  IL+G+T F++
Sbjct: 248 ILAGWATPTESGAMGAVGAMLLAALNRRLTLDTLWSACKSTMRITTMVIFILMGSTIFTL 307

Query: 297 AFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLM 356
            F    G   VE  + +LPG + GFL+     I +L FF+DF EI FI++P+LAP A  +
Sbjct: 308 VFHGMDGGHWVEHLLTSLPGGQTGFLLFVAAFIFVLAFFLDFFEIAFILIPLLAPAAKAL 367

Query: 357 DVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLI 416
            +DM WF +L+ + +QTSF+ PPFG +L+Y++G+AP SV + DIY G +P+IL+Q++V++
Sbjct: 368 GIDMVWFGVLVCVVMQTSFMHPPFGVALYYIRGIAPPSVKSSDIYLGAIPWILLQLVVVV 427

Query: 417 SLMVFP 422
            ++++P
Sbjct: 428 VVVLWP 433