Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  197 bits (500), Expect = 7e-55
 Identities = 129/419 (30%), Positives = 211/419 (50%), Gaps = 13/419 (3%)

Query: 11  LFALLLGFPVAFTFGGIA---LIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMG 67
           L  +++G P+ F F   A   L F L      +       +  I E   ++ +P F  MG
Sbjct: 13  LVLVVVGVPIVFAFAAAASLGLYFALGGIDPVINLLQQSALSGIKEYNFVV-IPCFTVMG 71

Query: 68  LVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLISLPVM 127
           +++     A  L   + R   G+ G +A++TV    + AA TGV  A+  A   ++ P M
Sbjct: 72  MLIAHCGAASDLFNVVNRGLRGVPGRLAVATVGGNAVFAAVTGVGVAAAAAFSHVAYPAM 131

Query: 128 LKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLVAAYI 187
            + RY +  A G I  S  LG +IPPS+ +I+   +    VG LF A ++PGL+L   Y 
Sbjct: 132 REARYSRSFATGCIAGSSVLGLLIPPSVFMIVWAILTEQSVGKLFAAGVFPGLLLAFLYA 191

Query: 188 IYILIYAKLNPQAAMPI--EPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVATPT 245
           +Y ++YAK+ P  A  +  E    L+R Q     +   I    LI V LG I+ G  TPT
Sbjct: 192 VYCMVYAKVKPSVAPELTNEERVSLTRTQ-----IGGSIGVGLLIAVTLGGIWFGFFTPT 246

Query: 246 ESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDE 305
           E +A+G  G+ +LA A G   W  V++A  E  +    +  +LL AT +S      G  +
Sbjct: 247 EGSAIGLVGSAILAWAKG-MRWRGVFNAFVEAGRTVTPIMLLLLTATIYSKLIALNGIPQ 305

Query: 306 LVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAI 365
            V+  + ++     G L+  + V  ILG  ID + I  + VPI  PVA+ + +D   FA+
Sbjct: 306 EVQALLESMGLGTGGTLLFMVAVWFILGAMIDSISIMLLTVPIFWPVAMALGIDPIVFAL 365

Query: 366 LIAMNLQTSFLTPPFGFSLFYLKGVAP-KSVTTMDIYRGVVPFILIQILVLISLMVFPS 423
           +  + ++   LTPPFG  +F +K   P +++T  +I++G VP+ ++ + +   + V+P+
Sbjct: 366 IGILVIEAGVLTPPFGIGVFVVKAAIPDRNITVSEIFKGSVPYWVLILFLAWLIYVWPA 424