Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  196 bits (498), Expect = 1e-54
 Identities = 119/422 (28%), Positives = 215/422 (50%), Gaps = 15/422 (3%)

Query: 8   FVALFALL-LGFPVAFTFG-----GIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVP 61
           FV +FAL+ +  P+    G     G AL+ G     + + A +P    S++ +  L+ +P
Sbjct: 17  FVGMFALMAVRVPIGIAMGIAGVGGFALLSGT-TPALNLLANVPL---SVLTDYNLIVIP 72

Query: 62  LFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGL 121
           +F+ MG     + ++ +L ++     G   GG+A++++      +A  G   A+   M  
Sbjct: 73  MFILMGAFASHSGMSTELFKAGRAWLGHRRGGLALASIAACGGFSAINGSSVATAATMTQ 132

Query: 122 ISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLM 181
           ++LP M +  Y  G + G I A GTLG +IPPS++++L G +    +  LF A + PG M
Sbjct: 133 VALPEMRRAGYHPGFSAGLIAAGGTLGIMIPPSVIMVLYGIMTETDITKLFAAGIIPGFM 192

Query: 182 LVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGV 241
            +  Y + + + A+L P   MP         R   ++ L AV+    L V VLG I+ G+
Sbjct: 193 AIGFYSVVVAVVARLRPDT-MPRGERLGWGERFASLRPLWAVV---VLFVFVLGGIYGGL 248

Query: 242 ATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYT 301
            T  E+A +G  G + + +  G+  W  +  A    ++V++ +  I++GA  F    T T
Sbjct: 249 FTVQEAAGVGAIGTLAIGMLRGRLGWKQIKAALIGALRVSSAIMMIVVGAYLFGYFLTIT 308

Query: 302 GGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMT 361
              +   E++++LP   +G L + M+  LILG  +D + +  + VPI+ P  + +  D  
Sbjct: 309 QFTQNAVEFLVHLPVGPYGVLALIMVGYLILGAVMDELAMILLTVPIVFPAMMQLGFDPV 368

Query: 362 WFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVF 421
           WF +++ M +    + PP G ++F +  +A + V    IY+G +PFI + ++ L+ L  F
Sbjct: 369 WFGVIVVMAVTFGMICPPVGMNVFVINSIA-RDVPLGAIYKGTMPFIAVDVVRLLILCAF 427

Query: 422 PS 423
           P+
Sbjct: 428 PA 429