Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  183 bits (465), Expect = 8e-51
 Identities = 128/436 (29%), Positives = 212/436 (48%), Gaps = 36/436 (8%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSI-------ME 53
           M   V+F + +  +L G P++ + G   L F        +F F    I+S+       +E
Sbjct: 1   MNSAVIFGLLIVLMLTGMPISISLGLTVLSF--------LFLFTQVPIESVALKLFTGIE 52

Query: 54  NTVLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVG 113
              +MA+P F+  G  L    +A +++     + G  +GG+ ++ V+   L AA +G   
Sbjct: 53  KFEIMAIPFFILAGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSP 112

Query: 114 ASVVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQ 173
           A+VVA+G I LP M+K  +      G I  SG LG +IPPS+V+++        VG LF 
Sbjct: 113 ATVVAIGSIILPAMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVATNTSVGALFM 172

Query: 174 AALWPGLML------VAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPL 227
           A + PGL+L      V  YI +   Y +L         P A  ++R    +A +  I  L
Sbjct: 173 AGVIPGLVLATVLGAVTWYIAWKNDYPRL---------PPATWAQR---FRAFREAIWGL 220

Query: 228 ALIVVVLGSIFAGVATPTESAALGGAGAILLAL-AYGQFSWSMVYDASKETVKVTAMVFA 286
           ALIV+V+G I+ GV TPTE+AA+    A L+A+  Y       V      +  ++AM+  
Sbjct: 221 ALIVIVIGGIYTGVFTPTEAAAMSAVYAFLIAVFVYKDMPLKGVGKILLSSASMSAMLLY 280

Query: 287 ILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIV 346
           I+  A  FS           + +W++        FL+V  +++L+ G F++   I  I+ 
Sbjct: 281 IITNAVLFSFVLANENIPHAIADWIVGKELGVIAFLLVVNVLLLVAGNFMEPSSIVLIMA 340

Query: 347 PILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVP 406
           PIL PVA+ + +D   F ILI +N++     PP G +L+   G+    +T + +   V P
Sbjct: 341 PILFPVAMKLGIDPIHFGILIVVNMEVGMCHPPVGLNLYVASGITKMGITELTV--AVWP 398

Query: 407 FILIQILVLISLMVFP 422
           ++L  +  L+ +  +P
Sbjct: 399 WLLAMLGFLMVVTYWP 414