Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., TRAP transporter, DctM subunit from Kangiella aquimarina DSM 16071

 Score =  427 bits (1098), Expect = e-124
 Identities = 222/444 (50%), Positives = 301/444 (67%), Gaps = 21/444 (4%)

Query: 1   MIGIVMFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEMFA-----FMPYRIQSIMENT 55
           ++ +++F      LL G+PVA +  G++LIF        M       F+P R+  IME +
Sbjct: 8   LMPLLLFLSVCLVLLWGYPVALSLAGVSLIFVAIGASTGMLDPIQLNFLPGRLYKIMERS 67

Query: 56  VLMAVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGAS 115
            L+AVPLF+FMGL+L++TK+AE LL+SM  LFG + GG+  +  +VG LLAASTG+VGA+
Sbjct: 68  TLIAVPLFIFMGLMLERTKIAEDLLDSMATLFGKLRGGMGFAVTIVGMLLAASTGIVGAT 127

Query: 116 VVAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLG---------- 165
           VV MGL+SLP M+K  Y   LA G ICASGTLGQIIPPSIVL+LLGDVL           
Sbjct: 128 VVTMGLLSLPAMIKRGYQPELATGVICASGTLGQIIPPSIVLVLLGDVLANAMTQAKSMG 187

Query: 166 ------VPVGDLFQAALWPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKA 219
                   +GDLF  A+ PG++LV  Y++Y+   A   P AA  IE D  +  R  + KA
Sbjct: 188 LQTEQVASIGDLFMGAIIPGMILVVGYMMYVAFVAWRKPNAAPAIEFDDSVDMRSVIFKA 247

Query: 220 LKAVIPPLALIVVVLGSIFAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVK 279
           L  +  PL LIV VLGSI  G ATPTE+AA+G  GAI+LA+   Q +++ + D  + TVK
Sbjct: 248 LINLSLPLILIVAVLGSILYGFATPTEAAAIGALGAIVLAMLRRQLTFARLKDVMRSTVK 307

Query: 280 VTAMVFAILLGATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFV 339
            T+MVF IL+GA+ FS+ F   GGD+L+ ++  +LPG  +  L++ MLV+ +LGF +DF+
Sbjct: 308 TTSMVFLILIGASIFSLVFRMYGGDDLIHQFFADLPGGLFTALLIIMLVMFLLGFILDFI 367

Query: 340 EICFIIVPILAPVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMD 399
           EI F++VPI+ PV ++M  D  W  ILIA+NLQTSFLTPPFGF+LFYL+GVAP+++ T  
Sbjct: 368 EITFVVVPIVGPVLLMMGADPIWLGILIAINLQTSFLTPPFGFALFYLRGVAPRTIRTSQ 427

Query: 400 IYRGVVPFILIQILVLISLMVFPS 423
           IYRGV+PFI+IQI+VLI +  +PS
Sbjct: 428 IYRGVIPFIVIQIVVLIMIAAWPS 451