Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., Sialic acid TRAP transporter permease protein SiaT from Azospirillum sp. SherDot2

 Score =  163 bits (412), Expect = 2e-44
 Identities = 119/432 (27%), Positives = 210/432 (48%), Gaps = 28/432 (6%)

Query: 2   IGIVMFFVALFALL--LGFPVAFTFGGIALIFGLWAEGIEMFAF-MPYRIQSIMENTVLM 58
           + +++FFV    ++  LG P+AF+FG     FG  +      A  M  R+   M + +L+
Sbjct: 208 LNLLLFFVVGVGVMVFLGLPIAFSFG--LATFGYLSLATSTPAIVMVGRMDEGMSHLILL 265

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGT--LLAASTGVVGASV 116
           +VPLFVF+G +++ T +A  ++  +  L G + GG  +S VL+G   L++  +G   A +
Sbjct: 266 SVPLFVFLGQLIEMTGMARAMVGFLASLLGHVRGG--LSYVLIGAMYLVSGISGSKAADM 323

Query: 117 VAMGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAAL 176
            A+  +  P M       G     + A+G   + IPPS+VLI +G V GV +  LF   L
Sbjct: 324 AAVAPVLFPEMKARGAKPGDLVALLSATGAQTETIPPSLVLITIGSVTGVSIAALFTGGL 383

Query: 177 WPGLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSR-----RQEVVKALKAVIPPLALIV 231
            PG++L  A  +  L++ +           D DLS      R E+ KA    +P +AL  
Sbjct: 384 LPGIVLGVA--LGGLVWWRYR---------DEDLSHVRRASRGEIGKAFLIALPAIALPF 432

Query: 232 VVLGSIFAGVATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLG 290
           ++  ++  GVAT TE + +G   A++   L Y QF W  +Y    +T  ++  +  I+  
Sbjct: 433 IIRAAVIEGVATATEVSTIGIVYAVIAGLLVYRQFDWRRIYPMLVDTAALSGAILLIIGA 492

Query: 291 ATAFSMAFTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILA 350
           AT  + A T +G    +   M  LPG    F+ V+++  +ILG  ++ +    +  P+L 
Sbjct: 493 ATGMAWALTQSGFSNTLATAMRELPGGVPVFIAVSIVAFIILGSVLEGIPAIVLFGPLLF 552

Query: 351 PVAVLMDVDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILI 410
           P+A  + V    +A+++ + +      PPFG    Y    A   ++  +  + ++ ++  
Sbjct: 553 PIARQIGVHEVHYAMIVILAMGIGLFAPPFGVG--YYAACAISRISPDEGMKPILGYLAA 610

Query: 411 QILVLISLMVFP 422
             + LI +  FP
Sbjct: 611 LAVGLIVVAAFP 622