Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Azospirillum sp. SherDot2

 Score =  216 bits (551), Expect = 8e-61
 Identities = 120/419 (28%), Positives = 221/419 (52%), Gaps = 6/419 (1%)

Query: 5   VMFFVALFALL-LGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLF 63
           ++  V +F +L  G  VA    G+  +         +   M   I     +  L A+PLF
Sbjct: 8   IVVVVTMFLMLGAGVWVALALAGVGFVAMALFTARPVGMVMATNIWGASTSWTLTALPLF 67

Query: 64  VFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLIS 123
           ++MG +L +T+++  + + +    G + G +    ++  ++ AA +G   A+   +G ++
Sbjct: 68  IWMGEILFRTRISSDMFKGLAPWTGWLPGRLMHVNIIGCSIFAAVSGSSAATAATIGRMT 127

Query: 124 LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLV 183
           +P + +  YD  +  G++  +GTLG +IPPSI++I+ G    V +  LF A + PG++L 
Sbjct: 128 IPELNRRGYDPMMTLGSLAGAGTLGLLIPPSIIMIVYGVAADVSIARLFIAGVIPGIVLT 187

Query: 184 AAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVAT 243
             +++Y+  ++ LNP    P EP        E ++   A+IP + LI  VLGSI+ G+AT
Sbjct: 188 GLFMLYVGGWSLLNPDRVPPPEPSQSFG---EKIRDTGALIPVMLLIAAVLGSIYVGIAT 244

Query: 244 PTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGG 303
           PTE+A +G  G+++LAL  G  +W+   D+       + M+  IL GA   ++A  YTG 
Sbjct: 245 PTEAAGIGVLGSLVLALVTGTLNWTTFRDSLFGAAHTSCMIGFILAGAAFLTVAMGYTGI 304

Query: 304 DELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWF 363
             L+ EW+  +       L+      +++G F+D + +  +   ++ P+     +D+ WF
Sbjct: 305 PRLLAEWITTMQLSPAALLVALTAFFVVMGCFLDGISMVVLTTSVILPMVQRAGIDLLWF 364

Query: 364 AILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMVFP 422
            I I + ++ + +TPP GF+LF L+ +  K + T  I +  +PF L+ ++++  L VFP
Sbjct: 365 GIYIIIVVEMAQITPPVGFNLFVLQSMTGKDIFT--IGKASLPFFLLMVVMVALLWVFP 421