Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., permease component of C4 dicarboxylate transporter from Agrobacterium fabrum C58

 Score =  390 bits (1003), Expect = e-113
 Identities = 199/438 (45%), Positives = 292/438 (66%), Gaps = 23/438 (5%)

Query: 6   MFFVALFALLLGFPVAFTFGGIALIFGLWAEGIEM-------FAFMPYRIQSIMENTVLM 58
           MF   +  LLLG+PVAF    +   FG    GIE+       F  +P RI   M N  L+
Sbjct: 1   MFAALIIVLLLGYPVAFALAFVGFFFGFI--GIELGLLPATLFQAIPDRIFGQMSNETLL 58

Query: 59  AVPLFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVA 118
           A+P F FMGL+L+K+ +AE LL+++G+LFG + GG+A + + VG +LAA+TGVV ASV++
Sbjct: 59  AIPFFTFMGLILEKSGMAEDLLDTIGQLFGPVRGGIAFAVIFVGAILAATTGVVAASVIS 118

Query: 119 MGLISLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWP 178
           MGLISLP+ML+Y YD+ +A GTI ASGTL QIIPPS+VLI+L D LG  VGD+++ AL P
Sbjct: 119 MGLISLPIMLRYGYDRKIAAGTIAASGTLAQIIPPSLVLIVLADQLGRSVGDMYKGALIP 178

Query: 179 GLMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQE-VVKALKAVIPPLALIVVVLGSI 237
           GLMLV AY +YI++ + ++P     +  +A   R  + ++K + +++PPL LI +VLG+I
Sbjct: 179 GLMLVGAYTLYIVVTSIISPAKVPALPSEARTLRGSKLLLKVITSLVPPLVLIFLVLGTI 238

Query: 238 FAGVATPTESAALGGAGAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMA 297
           F G+ATPTE  A+G  GA+ LALA  + +  ++  +   T K+++ V  ILLGA  FS+ 
Sbjct: 239 FLGIATPTEGGAMGAVGALALALANRKLNLGLIQQSLYATAKLSSFVLLILLGARVFSLT 298

Query: 298 FTYTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMD 357
           F    G   VE  M ++PG + GFLIV  L++  L FF+D+ E+ FII+P+LAPVA  + 
Sbjct: 299 FYGVNGHVWVEHLMTSVPGGEIGFLIVANLLVFFLAFFLDYFELAFIIIPLLAPVADALG 358

Query: 358 VDMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAP-------------KSVTTMDIYRGV 404
           +D+ WF +++A+N+QTSF+ PPFGFSLF+L+ VAP             + +T+  IY G 
Sbjct: 359 IDLIWFGVMLAVNMQTSFMHPPFGFSLFFLRSVAPTRAYRDRITGQTIQPITSSQIYLGA 418

Query: 405 VPFILIQILVLISLMVFP 422
           +P++ IQ+ ++I ++ FP
Sbjct: 419 IPYLFIQLAMVIIIIAFP 436