Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  179 bits (454), Expect = 1e-49
 Identities = 118/422 (27%), Positives = 214/422 (50%), Gaps = 15/422 (3%)

Query: 5   VMFFVALFAL-LLGFPVAFTFGGIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPLF 63
           V   +A F L +LG P+A     +A +  LW         +   + S M + +L+AVPLF
Sbjct: 3   VFLLIAFFGLSMLGVPLAIALA-LASVGTLWLFTSMPMDLLSQTMFSSMNSFLLVAVPLF 61

Query: 64  VFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLIS 123
           + +G V+++ ++AE++ +    + G + GG+    V+   + +  +G   A + ++G I 
Sbjct: 62  ILVGTVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVIFSGVSGSSVADIASVGAIE 121

Query: 124 LPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLGVPVGDLFQAALWPGLMLV 183
           +  M ++ + KG A G    + TL  IIPPSI++++ G +  V +G L  A L PGL + 
Sbjct: 122 IKAMERHGFPKGYAVGMTLCTSTLSSIIPPSILIVIAGSIANVSIGTLLIAGLVPGLFIA 181

Query: 184 AAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAGVAT 243
            A++++   Y+           P    + R  VV  L+A++P L  +++++G I +G+ T
Sbjct: 182 LAFLVFNHFYS-----VHYGYNPPTPFNFRLVVVTGLRAILPMLTPLILIIG-IASGLFT 235

Query: 244 PTESAALGGA-GAILLALAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTG 302
           PTE+AA+     A+L  + Y       + +    T +++  +  I   +   +  FT+ G
Sbjct: 236 PTEAAAIAVVYVAVLGVIVYRTLPVRELPEILISTARISGTILFIAATSQLAAWVFTFDG 295

Query: 303 GDELVEEWM--MNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDM 360
             E V E +  MNL G   G L++  + +LI+G F++ +   FI++P+L P    + +D 
Sbjct: 296 LPEQVAELLKAMNL-GPMTGMLVI-FVFLLIIGIFMEAIPAMFILIPVLMPPVEALGIDP 353

Query: 361 TWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLMV 420
             F I+  M L    +TPP G  LF    VA   +   D+ RG +  + +  L + +L++
Sbjct: 354 IHFLIVTVMTLTLGLVTPPVGVCLFAAAQVANMKIE--DVIRGSLAPMTVLTLAIFALVL 411

Query: 421 FP 422
           FP
Sbjct: 412 FP 413