Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  169 bits (428), Expect = 1e-46
 Identities = 123/424 (29%), Positives = 200/424 (47%), Gaps = 17/424 (4%)

Query: 5   VMFFVALFALLLGFPVAFTFG--GIALIFGLWAEGIEMFAFMPYRIQSIMENTVLMAVPL 62
           ++F V    +L+G P+AF  G    A +  L    I +F  M     S M    +MA+P 
Sbjct: 5   ILFGVFTLLMLIGTPIAFCLGIASFATVLYLGLPPIVVFQQM----NSGMNVFAMMAIPF 60

Query: 63  FVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGLI 122
           F+F G ++ +  +A +L+     L G + GG+    ++  TL    +G   A   A+G +
Sbjct: 61  FIFAGDLMVRGGIAHRLIRFAAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVGGL 120

Query: 123 SLPVMLKYRYDKGLACGTICASGTLGQIIPPSIVLILLGDVLG--VPVGDLFQAALWPGL 180
            +P M K  YDK  A      +  +  +IPPS  +IL     G  V V DLF A + PGL
Sbjct: 121 MIPQMAKRGYDKDYAVNVTVNAAIIALMIPPSHNMILYSIAAGGNVSVADLFTAGIIPGL 180

Query: 181 MLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGSIFAG 240
           +L AA ++   I A+   +   P EP    S+   ++  L A  P + LI ++ G + +G
Sbjct: 181 LLAAALMVTAYIVAR---RKGYPSEPFPGFSK---LMYYLLASFPGILLIGIIFGGVRSG 234

Query: 241 VATPTESAALGGAGAILLA-LAYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFT 299
           + T TES+ +    A L+A L Y + +W    +A    V+ TAMV  ++  A +F     
Sbjct: 235 IFTATESSCIAVLYAFLVAMLVYRELNWDGFVEAVMGAVRTTAMVLLVIGTAASFGWLMA 294

Query: 300 YTGGDELVEEWMMNLPGDKWGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVD 359
           +     L+   +  +  +    L+V  +++L+LG F+D   +  I  P+L PV     +D
Sbjct: 295 FLQVQTLMIAAISAISDNPIIVLLVINVILLLLGTFMDMAPMVIISTPVLLPVVKAFGID 354

Query: 360 MTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKSVTTMDIYRGVVPFILIQILVLISLM 419
              F +++ +N      TPP G  LF   G A   +T  +  R + PF    I VL+++ 
Sbjct: 355 PVHFGVVMILNAGIGLNTPPVGTVLFV--GCAVGGITIREAMRTIWPFFGASIAVLLAVT 412

Query: 420 VFPS 423
             PS
Sbjct: 413 YIPS 416