Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Variovorax sp. SCN45

 Score = 58.5 bits (140), Expect = 7e-14
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 1/148 (0%)

Query: 12  NRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPYAIK 71
           +R S  +G   +   +LL   + ++V  RYA N       + +  L+  +F+    Y + 
Sbjct: 9   DRFSTWIGKTFAWCALLLTLLISWEVFSRYALNKPHAWVLDAQIMLYGAMFMTAGAYTLS 68

Query: 72  AGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSGDPG 131
             GHVR D+ Y     + QA++D+   + F LP  + + + G  +A ES A+ E +    
Sbjct: 69  KNGHVRGDVLYGFFRPRTQAMVDLTLYIVFFLPGIVALTWAGWIYAGESLAIREQTFSAE 128

Query: 132 GLPYRWIIKAMIPLSFTFMAISGVGLII 159
            LP  +  K +IPL+   + + G+  II
Sbjct: 129 PLPL-YPFKYVIPLAGFTLLLQGIVEII 155