Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 45.8 bits (107), Expect = 4e-10
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 11/151 (7%)

Query: 5   IYVERLFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLL 64
           +++ RL  RLS    +L+ +  I+L+ +V   VV RY FND     + L   L   +  L
Sbjct: 18  LWLNRLCARLSKACLVLAIVGLIVLILSVQTQVVGRYVFNDTPTWTEALALQLVLYITAL 77

Query: 65  GIPYAIKAGGHV----RVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKES 120
           G+   ++  GH+     V L  E + +K + +I  L  L     F  ++ + G  + K  
Sbjct: 78  GVAVGVRDAGHIGLESLVSLLPEWMRLKVEILIHALVAL-----FGAIMTWSGWIWTKLK 132

Query: 121 Y-ALGETSGDPGGLPY-RWIIKAMIPLSFTF 149
           +  L    G P GL Y   +I  ++ + F+F
Sbjct: 133 WDELDPMLGLPAGLDYLALVIAGVLIVLFSF 163